Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 AL353779.1-201ENST00000434793 351 ntBASIC16.48■□□□□ 0.23
RNF43Q68DV7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 AC004790.1-201ENST00000612686 536 ntBASIC16.48■□□□□ 0.23
RNF43Q68DV7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 SDHAP3-202ENST00000515467 728 ntBASIC16.47■□□□□ 0.23
RNF43Q68DV7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 AC044860.1-202ENST00000559481 777 ntBASIC16.47■□□□□ 0.23
RNF43Q68DV7 AC243562.2-201ENST00000561247 970 ntBASIC16.47■□□□□ 0.23
RNF43Q68DV7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 AC025048.3-201ENST00000590609 569 ntBASIC16.47■□□□□ 0.23
RNF43Q68DV7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 MIR6805-201ENST00000615055 62 ntBASIC16.47■□□□□ 0.23
RNF43Q68DV7 AC005702.4-201ENST00000618393 416 ntBASIC16.47■□□□□ 0.23
RNF43Q68DV7 MIR6069-201ENST00000620069 79 ntBASIC16.47■□□□□ 0.23
RNF43Q68DV7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF43Q68DV7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF43Q68DV7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 MIR1909-201ENST00000411312 80 ntBASIC16.46■□□□□ 0.23
RNF43Q68DV7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 INE1-201ENST00000456273 945 ntBASIC16.46■□□□□ 0.23
RNF43Q68DV7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 AL606495.2-201ENST00000605867 535 ntBASIC16.46■□□□□ 0.23
RNF43Q68DV7 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.46■□□□□ 0.23
RNF43Q68DV7 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms