Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 AC093028.1-201ENST00000622998 982 ntBASIC18.75■□□□□ 0.59
RNF20Q5VTR2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF20Q5VTR2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 AC099063.4-201ENST00000641099 1602 ntBASIC18.74■□□□□ 0.59
RNF20Q5VTR2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 RPL5P21-201ENST00000404620 815 ntBASIC18.74■□□□□ 0.59
RNF20Q5VTR2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 AC027369.6-201ENST00000525520 931 ntBASIC18.74■□□□□ 0.59
RNF20Q5VTR2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 AL158211.3-201ENST00000607385 239 ntBASIC18.74■□□□□ 0.59
RNF20Q5VTR2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF20Q5VTR2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 AC074338.1-201ENST00000416825 156 ntBASIC18.73■□□□□ 0.59
RNF20Q5VTR2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 AL512361.1-201ENST00000554200 418 ntBASIC18.73■□□□□ 0.59
RNF20Q5VTR2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 AC126365.1-201ENST00000578585 1514 ntBASIC18.73■□□□□ 0.59
RNF20Q5VTR2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 KRT18P28-201ENST00000453838 1332 ntBASIC18.73■□□□□ 0.59
RNF20Q5VTR2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF20Q5VTR2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms