Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC27Q2M243 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC27Q2M243 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC27Q2M243 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC27Q2M243 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC27Q2M243 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC27Q2M243 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC27Q2M243 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC27Q2M243 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC27Q2M243 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC27Q2M243 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC27Q2M243 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC27Q2M243 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC27Q2M243 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC27Q2M243 ELK1P1-201ENST00000485699 580 ntBASIC20.27■□□□□ 0.84
CCDC27Q2M243 AC124283.3-201ENST00000570869 594 ntBASIC20.27■□□□□ 0.84
CCDC27Q2M243 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC27Q2M243 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC27Q2M243 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC27Q2M243 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC27Q2M243 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC27Q2M243 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC27Q2M243 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC27Q2M243 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC27Q2M243 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC27Q2M243 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC27Q2M243 MBP-202ENST00000355994 2772 ntTSL 5 BASIC20.27■□□□□ 0.83
CCDC27Q2M243 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC27Q2M243 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC27Q2M243 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC27Q2M243 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC27Q2M243 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC27Q2M243 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC27Q2M243 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC27Q2M243 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC27Q2M243 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 VDAC1P7-201ENST00000462417 847 ntBASIC20.26■□□□□ 0.83
CCDC27Q2M243 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 AC107373.2-201ENST00000607735 490 ntBASIC20.26■□□□□ 0.83
CCDC27Q2M243 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC27Q2M243 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC27Q2M243 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCDC27Q2M243 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC27Q2M243 AC093525.8-201ENST00000624099 1342 ntBASIC20.26■□□□□ 0.83
CCDC27Q2M243 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC27Q2M243 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC27Q2M243 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC27Q2M243 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC27Q2M243 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CCDC27Q2M243 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC27Q2M243 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC27Q2M243 AC140912.1-201ENST00000577171 1054 ntBASIC20.25■□□□□ 0.83
CCDC27Q2M243 AC138761.1-201ENST00000584393 385 ntBASIC20.25■□□□□ 0.83
CCDC27Q2M243 AC093813.1-201ENST00000605066 256 ntBASIC20.25■□□□□ 0.83
CCDC27Q2M243 INTS4P2-202ENST00000614726 2019 ntBASIC20.25■□□□□ 0.83
CCDC27Q2M243 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC27Q2M243 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC27Q2M243 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC27Q2M243 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC27Q2M243 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC27Q2M243 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC27Q2M243 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC27Q2M243 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC27Q2M243 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC27Q2M243 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20.24■□□□□ 0.83
CCDC27Q2M243 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC27Q2M243 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC27Q2M243 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms