Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.99□□□□□ -0.17
EFNB1P98172 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.99□□□□□ -0.17
EFNB1P98172 AL645728.2-202ENST00000641679 227 ntBASIC13.99□□□□□ -0.17
EFNB1P98172 AC018529.2-202ENST00000611482 3087 ntBASIC13.99□□□□□ -0.17
EFNB1P98172 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
EFNB1P98172 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.99□□□□□ -0.17
EFNB1P98172 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.99□□□□□ -0.17
EFNB1P98172 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNB1P98172 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.99□□□□□ -0.17
EFNB1P98172 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNB1P98172 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.99□□□□□ -0.17
EFNB1P98172 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
EFNB1P98172 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNB1P98172 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNB1P98172 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.99□□□□□ -0.17
EFNB1P98172 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.99□□□□□ -0.17
EFNB1P98172 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNB1P98172 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.99□□□□□ -0.17
EFNB1P98172 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.99□□□□□ -0.17
EFNB1P98172 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.99□□□□□ -0.17
EFNB1P98172 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNB1P98172 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
EFNB1P98172 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
EFNB1P98172 AC018442.1-201ENST00000421439 2061 ntBASIC13.99□□□□□ -0.17
EFNB1P98172 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
EFNB1P98172 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
EFNB1P98172 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
EFNB1P98172 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.98□□□□□ -0.17
EFNB1P98172 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.98□□□□□ -0.17
EFNB1P98172 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.98□□□□□ -0.17
EFNB1P98172 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
EFNB1P98172 AC006504.5-208ENST00000588784 2401 ntBASIC13.98□□□□□ -0.17
EFNB1P98172 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.98□□□□□ -0.17
EFNB1P98172 TARDBPP1-201ENST00000442013 1203 ntBASIC13.98□□□□□ -0.17
EFNB1P98172 AC009078.2-202ENST00000463353 338 ntBASIC13.98□□□□□ -0.17
EFNB1P98172 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.98□□□□□ -0.17
EFNB1P98172 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
EFNB1P98172 RARRES2P9-201ENST00000565168 469 ntBASIC13.98□□□□□ -0.17
EFNB1P98172 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.98□□□□□ -0.17
EFNB1P98172 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.98□□□□□ -0.17
EFNB1P98172 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.98□□□□□ -0.17
EFNB1P98172 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.98□□□□□ -0.17
EFNB1P98172 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
EFNB1P98172 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.98□□□□□ -0.17
EFNB1P98172 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.98□□□□□ -0.17
EFNB1P98172 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
EFNB1P98172 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
EFNB1P98172 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
EFNB1P98172 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNB1P98172 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.97□□□□□ -0.17
EFNB1P98172 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
EFNB1P98172 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.97□□□□□ -0.17
EFNB1P98172 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 AP001267.2-201ENST00000532619 2086 ntBASIC13.97□□□□□ -0.17
EFNB1P98172 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
EFNB1P98172 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
EFNB1P98172 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.97□□□□□ -0.17
EFNB1P98172 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
EFNB1P98172 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.97□□□□□ -0.17
EFNB1P98172 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
EFNB1P98172 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.97□□□□□ -0.17
EFNB1P98172 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
EFNB1P98172 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
EFNB1P98172 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
EFNB1P98172 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
EFNB1P98172 AL450487.1-201ENST00000426799 995 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms