Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.29■□□□□ 0.52
IRX3P78415 BAATP1-201ENST00000412284 1225 ntBASIC18.29■□□□□ 0.52
IRX3P78415 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.29■□□□□ 0.52
IRX3P78415 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.29■□□□□ 0.52
IRX3P78415 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.29■□□□□ 0.52
IRX3P78415 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.29■□□□□ 0.52
IRX3P78415 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.29■□□□□ 0.52
IRX3P78415 AC007551.1-201ENST00000457394 519 ntBASIC18.29■□□□□ 0.52
IRX3P78415 AL450472.2-201ENST00000603663 1156 ntBASIC18.29■□□□□ 0.52
IRX3P78415 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.29■□□□□ 0.52
IRX3P78415 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
IRX3P78415 MIR6869-201ENST00000619434 62 ntBASIC18.29■□□□□ 0.52
IRX3P78415 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IRX3P78415 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX3P78415 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX3P78415 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.29■□□□□ 0.52
IRX3P78415 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX3P78415 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IRX3P78415 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.29■□□□□ 0.52
IRX3P78415 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.29■□□□□ 0.52
IRX3P78415 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
IRX3P78415 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX3P78415 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IRX3P78415 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IRX3P78415 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.28■□□□□ 0.52
IRX3P78415 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
IRX3P78415 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.28■□□□□ 0.52
IRX3P78415 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.28■□□□□ 0.52
IRX3P78415 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.28■□□□□ 0.52
IRX3P78415 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
IRX3P78415 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
IRX3P78415 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
IRX3P78415 AC134407.2-201ENST00000625089 1978 ntBASIC18.28■□□□□ 0.52
IRX3P78415 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 AC099063.4-201ENST00000641099 1602 ntBASIC18.28■□□□□ 0.52
IRX3P78415 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.28■□□□□ 0.52
IRX3P78415 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.28■□□□□ 0.52
IRX3P78415 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 HAUS4P1-201ENST00000406739 1145 ntBASIC18.28■□□□□ 0.52
IRX3P78415 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.28■□□□□ 0.52
IRX3P78415 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.28■□□□□ 0.52
IRX3P78415 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.28■□□□□ 0.52
IRX3P78415 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.28■□□□□ 0.52
IRX3P78415 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.28■□□□□ 0.52
IRX3P78415 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
IRX3P78415 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.28■□□□□ 0.52
IRX3P78415 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.28■□□□□ 0.52
IRX3P78415 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.28■□□□□ 0.52
IRX3P78415 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
IRX3P78415 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 KRT8P44-201ENST00000441609 1350 ntBASIC18.28■□□□□ 0.52
IRX3P78415 REXO1L1P-202ENST00000608646 1974 ntBASIC18.28■□□□□ 0.52
IRX3P78415 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX3P78415 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
IRX3P78415 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX3P78415 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX3P78415 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX3P78415 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX3P78415 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IRX3P78415 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
IRX3P78415 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
IRX3P78415 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX3P78415 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX3P78415 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX3P78415 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.27■□□□□ 0.52
IRX3P78415 CICP14-201ENST00000629111 2732 ntBASIC18.27■□□□□ 0.52
IRX3P78415 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.27■□□□□ 0.52
IRX3P78415 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IRX3P78415 AC092933.1-201ENST00000393644 945 ntBASIC18.27■□□□□ 0.52
IRX3P78415 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.27■□□□□ 0.52
IRX3P78415 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.27■□□□□ 0.52
IRX3P78415 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IRX3P78415 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
IRX3P78415 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.27■□□□□ 0.52
IRX3P78415 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.27■□□□□ 0.52
IRX3P78415 CLUHP6-201ENST00000580789 941 ntBASIC18.27■□□□□ 0.52
IRX3P78415 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.27■□□□□ 0.52
IRX3P78415 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.27■□□□□ 0.52
IRX3P78415 MIR6787-201ENST00000616675 61 ntBASIC18.27■□□□□ 0.52
IRX3P78415 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.27■□□□□ 0.52
IRX3P78415 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms