Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 AC011742.3-201ENST00000439053 820 ntBASIC18.37■□□□□ 0.53
CNTNAP1P78357 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 MTHFR-217ENST00000641820 1569 ntBASIC18.37■□□□□ 0.53
CNTNAP1P78357 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 AC022188.1-201ENST00000620960 1664 ntBASIC18.37■□□□□ 0.53
CNTNAP1P78357 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNTNAP1P78357 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNTNAP1P78357 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CNTNAP1P78357 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNTNAP1P78357 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNTNAP1P78357 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 AC026316.1-201ENST00000398900 414 ntBASIC18.36■□□□□ 0.53
CNTNAP1P78357 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNTNAP1P78357 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.36■□□□□ 0.53
CNTNAP1P78357 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.36■□□□□ 0.53
CNTNAP1P78357 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.36■□□□□ 0.53
CNTNAP1P78357 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNTNAP1P78357 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.36■□□□□ 0.53
CNTNAP1P78357 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.36■□□□□ 0.53
CNTNAP1P78357 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
CNTNAP1P78357 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNTNAP1P78357 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 CEP164P1-201ENST00000455142 418 ntBASIC18.35■□□□□ 0.53
CNTNAP1P78357 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 AP001527.2-201ENST00000614441 631 ntBASIC18.35■□□□□ 0.53
CNTNAP1P78357 AL353770.1-201ENST00000614915 403 ntBASIC18.35■□□□□ 0.53
CNTNAP1P78357 AC103691.2-201ENST00000618824 433 ntBASIC18.35■□□□□ 0.53
CNTNAP1P78357 PRSS30P-206ENST00000641773 873 ntBASIC18.35■□□□□ 0.53
CNTNAP1P78357 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTNAP1P78357 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTNAP1P78357 PCDHA12-202ENST00000613593 2588 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms