Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBA52P62987 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.65□□□□□ -0.22
UBA52P62987 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.65□□□□□ -0.22
UBA52P62987 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.23
UBA52P62987 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.65□□□□□ -0.23
UBA52P62987 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.64□□□□□ -0.23
UBA52P62987 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
UBA52P62987 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 AC069224.1-201ENST00000566372 1715 ntBASIC13.64□□□□□ -0.23
UBA52P62987 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.64□□□□□ -0.23
UBA52P62987 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
UBA52P62987 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.64□□□□□ -0.23
UBA52P62987 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UBA52P62987 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.64□□□□□ -0.23
UBA52P62987 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UBA52P62987 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.64□□□□□ -0.23
UBA52P62987 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.64□□□□□ -0.23
UBA52P62987 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.64□□□□□ -0.23
UBA52P62987 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.64□□□□□ -0.23
UBA52P62987 AC140658.5-201ENST00000438532 169 ntBASIC13.64□□□□□ -0.23
UBA52P62987 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 RN7SL589P-201ENST00000481268 310 ntBASIC13.64□□□□□ -0.23
UBA52P62987 KRT8P48-201ENST00000515599 1220 ntBASIC13.64□□□□□ -0.23
UBA52P62987 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.64□□□□□ -0.23
UBA52P62987 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.64□□□□□ -0.23
UBA52P62987 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 AC099522.2-201ENST00000607001 744 ntBASIC13.64□□□□□ -0.23
UBA52P62987 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.64□□□□□ -0.23
UBA52P62987 AJ011932.1-201ENST00000621707 465 ntBASIC13.64□□□□□ -0.23
UBA52P62987 AL645728.2-201ENST00000641974 660 ntBASIC13.64□□□□□ -0.23
UBA52P62987 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.64□□□□□ -0.23
UBA52P62987 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.64□□□□□ -0.23
UBA52P62987 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.64□□□□□ -0.23
UBA52P62987 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 AL390755.1-201ENST00000623716 2027 ntBASIC13.64□□□□□ -0.23
UBA52P62987 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
UBA52P62987 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UBA52P62987 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.64□□□□□ -0.23
UBA52P62987 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBA52P62987 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
UBA52P62987 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UBA52P62987 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.63□□□□□ -0.23
UBA52P62987 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.63□□□□□ -0.23
UBA52P62987 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.63□□□□□ -0.23
UBA52P62987 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
UBA52P62987 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.63□□□□□ -0.23
UBA52P62987 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.63□□□□□ -0.23
UBA52P62987 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBA52P62987 AL592309.1-201ENST00000443127 649 ntBASIC13.63□□□□□ -0.23
UBA52P62987 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UBA52P62987 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
UBA52P62987 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.63□□□□□ -0.23
UBA52P62987 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.63□□□□□ -0.23
UBA52P62987 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms