Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
RPL39P62891 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.15□□□□□ -0.62
RPL39P62891 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
RPL39P62891 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.15□□□□□ -0.62
RPL39P62891 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.15□□□□□ -0.62
RPL39P62891 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
RPL39P62891 AL513480.1-201ENST00000451731 511 ntBASIC11.15□□□□□ -0.62
RPL39P62891 AC108073.2-201ENST00000464002 357 ntBASIC11.15□□□□□ -0.62
RPL39P62891 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.15□□□□□ -0.62
RPL39P62891 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.15□□□□□ -0.62
RPL39P62891 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.15□□□□□ -0.62
RPL39P62891 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.15□□□□□ -0.62
RPL39P62891 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
RPL39P62891 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.15□□□□□ -0.62
RPL39P62891 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.15□□□□□ -0.62
RPL39P62891 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.15□□□□□ -0.62
RPL39P62891 AC093458.2-201ENST00000623150 629 ntBASIC11.15□□□□□ -0.62
RPL39P62891 AL358472.4-201ENST00000633140 710 ntBASIC11.15□□□□□ -0.62
RPL39P62891 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.15□□□□□ -0.62
RPL39P62891 CICP14-201ENST00000629111 2732 ntBASIC11.15□□□□□ -0.62
RPL39P62891 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
RPL39P62891 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.15□□□□□ -0.62
RPL39P62891 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
RPL39P62891 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
RPL39P62891 ZBED1P1-201ENST00000502364 1930 ntBASIC11.15□□□□□ -0.62
RPL39P62891 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
RPL39P62891 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
RPL39P62891 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.15□□□□□ -0.63
RPL39P62891 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
RPL39P62891 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
RPL39P62891 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
RPL39P62891 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
RPL39P62891 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
RPL39P62891 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.14□□□□□ -0.63
RPL39P62891 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 AC079781.5-202ENST00000641784 3743 ntBASIC11.14□□□□□ -0.63
RPL39P62891 AC041040.2-201ENST00000622926 2899 ntBASIC11.14□□□□□ -0.63
RPL39P62891 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.14□□□□□ -0.63
RPL39P62891 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.14□□□□□ -0.63
RPL39P62891 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
RPL39P62891 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
RPL39P62891 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.14□□□□□ -0.63
RPL39P62891 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 CXCL1P1-201ENST00000502804 216 ntBASIC11.14□□□□□ -0.63
RPL39P62891 KRT18P21-201ENST00000515767 1272 ntBASIC11.14□□□□□ -0.63
RPL39P62891 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.14□□□□□ -0.63
RPL39P62891 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.14□□□□□ -0.63
RPL39P62891 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.14□□□□□ -0.63
RPL39P62891 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 AC002347.1-201ENST00000569543 541 ntBASIC11.14□□□□□ -0.63
RPL39P62891 AL356488.2-201ENST00000602755 427 ntBASIC11.14□□□□□ -0.63
RPL39P62891 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.14□□□□□ -0.63
RPL39P62891 AL078644.1-201ENST00000609881 752 ntBASIC11.14□□□□□ -0.63
RPL39P62891 REXO1L6P-202ENST00000619970 1078 ntBASIC11.14□□□□□ -0.63
RPL39P62891 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.14□□□□□ -0.63
RPL39P62891 AL645728.2-201ENST00000641974 660 ntBASIC11.14□□□□□ -0.63
RPL39P62891 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.14□□□□□ -0.63
RPL39P62891 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.14□□□□□ -0.63
RPL39P62891 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.14□□□□□ -0.63
RPL39P62891 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
RPL39P62891 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPL39P62891 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
RPL39P62891 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms