Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MCCD1P59942 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.65■□□□□ 0.26
MCCD1P59942 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.65■□□□□ 0.26
MCCD1P59942 LINC01101-201ENST00000622953 1884 ntBASIC16.65■□□□□ 0.26
MCCD1P59942 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.65■□□□□ 0.26
MCCD1P59942 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MCCD1P59942 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MCCD1P59942 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MCCD1P59942 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.64■□□□□ 0.25
MCCD1P59942 TNRC18P2-201ENST00000417666 2714 ntBASIC16.64■□□□□ 0.25
MCCD1P59942 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 LINC00528-201ENST00000600723 2160 ntBASIC16.64■□□□□ 0.25
MCCD1P59942 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MCCD1P59942 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.64■□□□□ 0.25
MCCD1P59942 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.64■□□□□ 0.25
MCCD1P59942 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.64■□□□□ 0.25
MCCD1P59942 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.64■□□□□ 0.25
MCCD1P59942 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 NUS1P3-201ENST00000423502 862 ntBASIC16.64■□□□□ 0.25
MCCD1P59942 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.64■□□□□ 0.25
MCCD1P59942 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.64■□□□□ 0.25
MCCD1P59942 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.64■□□□□ 0.25
MCCD1P59942 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.64■□□□□ 0.25
MCCD1P59942 DUX4L47-201ENST00000566374 394 ntBASIC16.64■□□□□ 0.25
MCCD1P59942 AC120045.2-201ENST00000567334 178 ntBASIC16.64■□□□□ 0.25
MCCD1P59942 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MCCD1P59942 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.64■□□□□ 0.25
MCCD1P59942 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.64■□□□□ 0.25
MCCD1P59942 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC16.64■□□□□ 0.25
MCCD1P59942 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.64■□□□□ 0.25
MCCD1P59942 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
MCCD1P59942 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MCCD1P59942 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
MCCD1P59942 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MCCD1P59942 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.64■□□□□ 0.25
MCCD1P59942 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MCCD1P59942 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MCCD1P59942 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.63■□□□□ 0.25
MCCD1P59942 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
MCCD1P59942 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.63■□□□□ 0.25
MCCD1P59942 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MCCD1P59942 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MCCD1P59942 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.63■□□□□ 0.25
MCCD1P59942 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MCCD1P59942 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.63■□□□□ 0.25
MCCD1P59942 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.63■□□□□ 0.25
MCCD1P59942 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MCCD1P59942 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.63■□□□□ 0.25
MCCD1P59942 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MCCD1P59942 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MCCD1P59942 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MCCD1P59942 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MCCD1P59942 PIN1P1-201ENST00000412108 996 ntBASIC16.63■□□□□ 0.25
MCCD1P59942 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.63■□□□□ 0.25
MCCD1P59942 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.63■□□□□ 0.25
MCCD1P59942 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.63■□□□□ 0.25
MCCD1P59942 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MCCD1P59942 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.63■□□□□ 0.25
MCCD1P59942 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.63■□□□□ 0.25
MCCD1P59942 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.63■□□□□ 0.25
MCCD1P59942 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.63■□□□□ 0.25
MCCD1P59942 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.63■□□□□ 0.25
MCCD1P59942 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.63■□□□□ 0.25
MCCD1P59942 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.63■□□□□ 0.25
MCCD1P59942 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.63■□□□□ 0.25
MCCD1P59942 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.63■□□□□ 0.25
MCCD1P59942 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MCCD1P59942 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MCCD1P59942 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
MCCD1P59942 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
MCCD1P59942 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MCCD1P59942 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.63■□□□□ 0.25
MCCD1P59942 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.62■□□□□ 0.25
MCCD1P59942 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.62■□□□□ 0.25
MCCD1P59942 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MCCD1P59942 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MCCD1P59942 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms