Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC11.67□□□□□ -0.54
CMC4P56277 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.67□□□□□ -0.54
CMC4P56277 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.67□□□□□ -0.54
CMC4P56277 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.67□□□□□ -0.54
CMC4P56277 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.67□□□□□ -0.54
CMC4P56277 AC002472.2-201ENST00000442739 958 ntBASIC11.67□□□□□ -0.54
CMC4P56277 SPTLC1P1-201ENST00000447199 261 ntBASIC11.67□□□□□ -0.54
CMC4P56277 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.67□□□□□ -0.54
CMC4P56277 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.67□□□□□ -0.54
CMC4P56277 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.67□□□□□ -0.54
CMC4P56277 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.67□□□□□ -0.54
CMC4P56277 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.67□□□□□ -0.54
CMC4P56277 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC11.67□□□□□ -0.54
CMC4P56277 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.67□□□□□ -0.54
CMC4P56277 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.67□□□□□ -0.54
CMC4P56277 AL645728.2-202ENST00000641679 227 ntBASIC11.67□□□□□ -0.54
CMC4P56277 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.67□□□□□ -0.54
CMC4P56277 AC007541.1-201ENST00000570282 1469 ntBASIC11.67□□□□□ -0.54
CMC4P56277 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CMC4P56277 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CMC4P56277 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CMC4P56277 AC079328.2-201ENST00000561241 3354 ntBASIC11.67□□□□□ -0.54
CMC4P56277 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
CMC4P56277 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CMC4P56277 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CMC4P56277 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
CMC4P56277 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.66□□□□□ -0.54
CMC4P56277 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC11.66□□□□□ -0.54
CMC4P56277 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
CMC4P56277 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CMC4P56277 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CMC4P56277 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.66□□□□□ -0.54
CMC4P56277 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.66□□□□□ -0.54
CMC4P56277 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.66□□□□□ -0.54
CMC4P56277 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.66□□□□□ -0.54
CMC4P56277 RN7SL399P-201ENST00000471648 279 ntBASIC11.66□□□□□ -0.54
CMC4P56277 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.66□□□□□ -0.54
CMC4P56277 AC190387.1-201ENST00000551683 408 ntBASIC11.66□□□□□ -0.54
CMC4P56277 AC104794.3-201ENST00000566840 1248 ntBASIC11.66□□□□□ -0.54
CMC4P56277 RN7SL204P-201ENST00000582831 262 ntBASIC11.66□□□□□ -0.54
CMC4P56277 AC000095.1-201ENST00000603208 874 ntBASIC11.66□□□□□ -0.54
CMC4P56277 LINC01115-203ENST00000606068 577 ntBASIC11.66□□□□□ -0.54
CMC4P56277 AC093726.1-201ENST00000608064 963 ntBASIC11.66□□□□□ -0.54
CMC4P56277 AF228730.6-201ENST00000641497 218 ntBASIC11.66□□□□□ -0.54
CMC4P56277 AC084121.3-201ENST00000641716 218 ntBASIC11.66□□□□□ -0.54
CMC4P56277 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC11.66□□□□□ -0.54
CMC4P56277 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CMC4P56277 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.66□□□□□ -0.54
CMC4P56277 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms