Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
GFRA1P56159 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.99□□□□□ -0.17
GFRA1P56159 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 AL162727.3-201ENST00000635661 2787 ntBASIC13.99□□□□□ -0.17
GFRA1P56159 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.98□□□□□ -0.17
GFRA1P56159 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.98□□□□□ -0.17
GFRA1P56159 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
GFRA1P56159 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 AC009090.5-201ENST00000624886 2285 ntBASIC13.98□□□□□ -0.17
GFRA1P56159 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
GFRA1P56159 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
GFRA1P56159 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.98□□□□□ -0.17
GFRA1P56159 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.98□□□□□ -0.17
GFRA1P56159 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.98□□□□□ -0.17
GFRA1P56159 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.98□□□□□ -0.17
GFRA1P56159 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
GFRA1P56159 TMEM14DP-201ENST00000422205 345 ntBASIC13.98□□□□□ -0.17
GFRA1P56159 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.98□□□□□ -0.17
GFRA1P56159 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.98□□□□□ -0.17
GFRA1P56159 AC106886.1-201ENST00000568660 600 ntBASIC13.98□□□□□ -0.17
GFRA1P56159 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.98□□□□□ -0.17
GFRA1P56159 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
GFRA1P56159 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
GFRA1P56159 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GFRA1P56159 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
GFRA1P56159 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GFRA1P56159 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GFRA1P56159 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GFRA1P56159 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
GFRA1P56159 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
GFRA1P56159 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GFRA1P56159 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.97□□□□□ -0.17
GFRA1P56159 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
GFRA1P56159 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
GFRA1P56159 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
GFRA1P56159 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.97□□□□□ -0.17
GFRA1P56159 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.97□□□□□ -0.17
GFRA1P56159 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.97□□□□□ -0.17
GFRA1P56159 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.97□□□□□ -0.17
GFRA1P56159 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
GFRA1P56159 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.97□□□□□ -0.17
GFRA1P56159 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.97□□□□□ -0.17
GFRA1P56159 MIR5189-201ENST00000577370 114 ntBASIC13.97□□□□□ -0.17
GFRA1P56159 CLUHP6-201ENST00000580789 941 ntBASIC13.97□□□□□ -0.17
GFRA1P56159 AC008735.3-201ENST00000596646 500 ntBASIC13.97□□□□□ -0.17
GFRA1P56159 AL162274.1-201ENST00000617191 1098 ntBASIC13.97□□□□□ -0.17
GFRA1P56159 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.97□□□□□ -0.17
GFRA1P56159 AC005252.2-201ENST00000624630 1141 ntBASIC13.97□□□□□ -0.17
GFRA1P56159 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.97□□□□□ -0.17
GFRA1P56159 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.97□□□□□ -0.17
GFRA1P56159 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.97□□□□□ -0.17
GFRA1P56159 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.97□□□□□ -0.17
GFRA1P56159 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.97□□□□□ -0.17
GFRA1P56159 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GFRA1P56159 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GFRA1P56159 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms