Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH12P55289 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH12P55289 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH12P55289 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH12P55289 ADH5P3-201ENST00000433842 1137 ntBASIC14.68□□□□□ -0.06
CDH12P55289 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH12P55289 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
CDH12P55289 AC243562.1-201ENST00000560672 389 ntBASIC14.68□□□□□ -0.06
CDH12P55289 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.68□□□□□ -0.06
CDH12P55289 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH12P55289 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
CDH12P55289 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH12P55289 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH12P55289 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDH12P55289 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH12P55289 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH12P55289 AC007292.2-201ENST00000593524 1812 ntBASIC14.68□□□□□ -0.06
CDH12P55289 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH12P55289 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH12P55289 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDH12P55289 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CDH12P55289 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CDH12P55289 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDH12P55289 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH12P55289 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 AC142381.1-201ENST00000426099 345 ntBASIC14.67□□□□□ -0.06
CDH12P55289 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH12P55289 RN7SL589P-201ENST00000481268 310 ntBASIC14.67□□□□□ -0.06
CDH12P55289 AC040169.1-201ENST00000565382 521 ntBASIC14.67□□□□□ -0.06
CDH12P55289 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH12P55289 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH12P55289 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH12P55289 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDH12P55289 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDH12P55289 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH12P55289 AC148477.4-201ENST00000613430 1793 ntBASIC14.67□□□□□ -0.06
CDH12P55289 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH12P55289 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH12P55289 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.67□□□□□ -0.06
CDH12P55289 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CDH12P55289 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH12P55289 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH12P55289 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH12P55289 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH12P55289 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH12P55289 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH12P55289 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
CDH12P55289 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CDH12P55289 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CDH12P55289 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH12P55289 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 MCCD1P2-201ENST00000423228 335 ntBASIC14.66□□□□□ -0.06
CDH12P55289 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.66□□□□□ -0.06
CDH12P55289 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms