Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 FGD5P1-202ENST00000614866 2498 ntBASIC13.95□□□□□ -0.18
SLC25A1P53007 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC25A1P53007 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC25A1P53007 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC25A1P53007 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SLC25A1P53007 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SLC25A1P53007 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC25A1P53007 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SLC25A1P53007 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SLC25A1P53007 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC25A1P53007 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SLC25A1P53007 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC25A1P53007 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 AL022342.1-201ENST00000400363 863 ntBASIC13.94□□□□□ -0.18
SLC25A1P53007 AL627223.1-201ENST00000416693 442 ntBASIC13.94□□□□□ -0.18
SLC25A1P53007 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SLC25A1P53007 TARDBPP1-201ENST00000442013 1203 ntBASIC13.94□□□□□ -0.18
SLC25A1P53007 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC25A1P53007 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC25A1P53007 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.94□□□□□ -0.18
SLC25A1P53007 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC25A1P53007 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC25A1P53007 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.94□□□□□ -0.18
SLC25A1P53007 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
SLC25A1P53007 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 RN7SL828P-201ENST00000607615 303 ntBASIC13.94□□□□□ -0.18
SLC25A1P53007 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SLC25A1P53007 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC25A1P53007 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SLC25A1P53007 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.94□□□□□ -0.18
SLC25A1P53007 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SLC25A1P53007 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC25A1P53007 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC25A1P53007 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC25A1P53007 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC25A1P53007 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLC25A1P53007 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SLC25A1P53007 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SLC25A1P53007 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
SLC25A1P53007 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
SLC25A1P53007 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC25A1P53007 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SLC25A1P53007 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC25A1P53007 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC25A1P53007 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC25A1P53007 GHSR-202ENST00000427970 912 ntBASIC13.93□□□□□ -0.18
SLC25A1P53007 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC25A1P53007 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC25A1P53007 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC25A1P53007 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC25A1P53007 YBX1P5-201ENST00000509441 847 ntBASIC13.93□□□□□ -0.18
SLC25A1P53007 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC25A1P53007 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC25A1P53007 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.93□□□□□ -0.18
SLC25A1P53007 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.93□□□□□ -0.18
SLC25A1P53007 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 AC011467.4-201ENST00000594891 528 ntBASIC13.93□□□□□ -0.18
SLC25A1P53007 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC25A1P53007 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC25A1P53007 AC003101.2-201ENST00000612557 442 ntBASIC13.93□□□□□ -0.18
SLC25A1P53007 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC25A1P53007 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC25A1P53007 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms