Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
EFNA3P52797 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
EFNA3P52797 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.65□□□□□ -0.06
EFNA3P52797 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
EFNA3P52797 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.64□□□□□ -0.07
EFNA3P52797 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.64□□□□□ -0.07
EFNA3P52797 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.64□□□□□ -0.07
EFNA3P52797 AC008894.3-201ENST00000624324 3103 ntBASIC14.64□□□□□ -0.07
EFNA3P52797 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.64□□□□□ -0.07
EFNA3P52797 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.64□□□□□ -0.07
EFNA3P52797 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
EFNA3P52797 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.64□□□□□ -0.07
EFNA3P52797 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.64□□□□□ -0.07
EFNA3P52797 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
EFNA3P52797 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.64□□□□□ -0.07
EFNA3P52797 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
EFNA3P52797 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.64□□□□□ -0.07
EFNA3P52797 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 AC079776.1-201ENST00000401540 1152 ntBASIC14.64□□□□□ -0.07
EFNA3P52797 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 AL442647.2-201ENST00000429864 857 ntBASIC14.64□□□□□ -0.07
EFNA3P52797 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.64□□□□□ -0.07
EFNA3P52797 AL033527.5-201ENST00000641382 801 ntBASIC14.64□□□□□ -0.07
EFNA3P52797 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 AC063926.3-201ENST00000624734 5658 ntBASIC14.64□□□□□ -0.07
EFNA3P52797 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.64□□□□□ -0.07
EFNA3P52797 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
EFNA3P52797 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.64□□□□□ -0.07
EFNA3P52797 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.64□□□□□ -0.07
EFNA3P52797 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.64□□□□□ -0.07
EFNA3P52797 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
EFNA3P52797 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
EFNA3P52797 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.64□□□□□ -0.07
EFNA3P52797 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.64□□□□□ -0.07
EFNA3P52797 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.63□□□□□ -0.07
EFNA3P52797 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.63□□□□□ -0.07
EFNA3P52797 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.63□□□□□ -0.07
EFNA3P52797 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA3P52797 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA3P52797 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.63□□□□□ -0.07
EFNA3P52797 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA3P52797 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.63□□□□□ -0.07
EFNA3P52797 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA3P52797 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA3P52797 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 AC022188.1-201ENST00000620960 1664 ntBASIC14.63□□□□□ -0.07
EFNA3P52797 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
EFNA3P52797 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA3P52797 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
EFNA3P52797 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA3P52797 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.63□□□□□ -0.07
EFNA3P52797 AC104596.2-201ENST00000512793 793 ntBASIC14.63□□□□□ -0.07
EFNA3P52797 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.63□□□□□ -0.07
EFNA3P52797 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA3P52797 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA3P52797 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA3P52797 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.63□□□□□ -0.07
EFNA3P52797 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.63□□□□□ -0.07
EFNA3P52797 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
EFNA3P52797 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.63□□□□□ -0.07
EFNA3P52797 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 AC092850.2-201ENST00000623821 2697 ntBASIC14.63□□□□□ -0.07
EFNA3P52797 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA3P52797 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA3P52797 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA3P52797 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms