Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLCN3P51790 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLCN3P51790 DOC2GP-204ENST00000639052 2548 ntBASIC17.14■□□□□ 0.33
CLCN3P51790 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN3P51790 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN3P51790 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN3P51790 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN3P51790 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN3P51790 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN3P51790 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN3P51790 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.14■□□□□ 0.33
CLCN3P51790 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN3P51790 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLCN3P51790 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN3P51790 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN3P51790 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN3P51790 AL138799.1-201ENST00000448213 1675 ntBASIC17.13■□□□□ 0.33
CLCN3P51790 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLCN3P51790 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 AC009090.5-201ENST00000624886 2285 ntBASIC17.13■□□□□ 0.33
CLCN3P51790 AC026691.1-201ENST00000602502 2017 ntBASIC17.13■□□□□ 0.33
CLCN3P51790 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLCN3P51790 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN3P51790 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN3P51790 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN3P51790 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN3P51790 KLF2P4-201ENST00000451959 1225 ntBASIC17.13■□□□□ 0.33
CLCN3P51790 FTH1P14-201ENST00000482930 551 ntBASIC17.13■□□□□ 0.33
CLCN3P51790 AC022137.2-201ENST00000503482 481 ntBASIC17.13■□□□□ 0.33
CLCN3P51790 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.13■□□□□ 0.33
CLCN3P51790 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.13■□□□□ 0.33
CLCN3P51790 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.13■□□□□ 0.33
CLCN3P51790 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN3P51790 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN3P51790 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN3P51790 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN3P51790 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN3P51790 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLCN3P51790 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 AC093525.8-201ENST00000624099 1342 ntBASIC17.13■□□□□ 0.33
CLCN3P51790 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN3P51790 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CLCN3P51790 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN3P51790 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN3P51790 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN3P51790 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN3P51790 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CLCN3P51790 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.12■□□□□ 0.33
CLCN3P51790 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCN3P51790 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLCN3P51790 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCN3P51790 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.12■□□□□ 0.33
CLCN3P51790 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.12■□□□□ 0.33
CLCN3P51790 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.12■□□□□ 0.33
CLCN3P51790 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN3P51790 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCN3P51790 AC244669.2-201ENST00000612320 853 ntBASIC17.12■□□□□ 0.33
CLCN3P51790 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN3P51790 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN3P51790 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLCN3P51790 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLCN3P51790 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN3P51790 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN3P51790 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN3P51790 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN3P51790 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CLCN3P51790 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN3P51790 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms