Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CLK1P49759 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.84□□□□□ -0.03
CLK1P49759 HTR5BP-201ENST00000430851 1154 ntBASIC14.84□□□□□ -0.03
CLK1P49759 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CLK1P49759 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.84□□□□□ -0.03
CLK1P49759 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.84□□□□□ -0.03
CLK1P49759 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.84□□□□□ -0.03
CLK1P49759 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.84□□□□□ -0.03
CLK1P49759 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CLK1P49759 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CLK1P49759 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.84□□□□□ -0.03
CLK1P49759 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLK1P49759 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLK1P49759 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.84□□□□□ -0.03
CLK1P49759 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.84□□□□□ -0.03
CLK1P49759 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
CLK1P49759 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CLK1P49759 AC020658.6-201ENST00000623564 1870 ntBASIC14.84□□□□□ -0.03
CLK1P49759 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.84□□□□□ -0.03
CLK1P49759 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLK1P49759 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLK1P49759 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
CLK1P49759 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CLK1P49759 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLK1P49759 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.83□□□□□ -0.03
CLK1P49759 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CLK1P49759 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLK1P49759 TFAMP1-201ENST00000412727 736 ntBASIC14.83□□□□□ -0.04
CLK1P49759 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.83□□□□□ -0.04
CLK1P49759 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.83□□□□□ -0.04
CLK1P49759 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.83□□□□□ -0.04
CLK1P49759 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.83□□□□□ -0.04
CLK1P49759 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.83□□□□□ -0.04
CLK1P49759 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.83□□□□□ -0.04
CLK1P49759 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.83□□□□□ -0.04
CLK1P49759 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.83□□□□□ -0.04
CLK1P49759 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.83□□□□□ -0.04
CLK1P49759 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLK1P49759 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.83□□□□□ -0.04
CLK1P49759 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
CLK1P49759 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.83□□□□□ -0.04
CLK1P49759 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLK1P49759 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLK1P49759 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.82□□□□□ -0.04
CLK1P49759 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLK1P49759 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
CLK1P49759 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.82□□□□□ -0.04
CLK1P49759 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.82□□□□□ -0.04
CLK1P49759 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CLK1P49759 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.82□□□□□ -0.04
CLK1P49759 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLK1P49759 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.82□□□□□ -0.04
CLK1P49759 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.82□□□□□ -0.04
CLK1P49759 BX842568.4-201ENST00000421222 227 ntBASIC14.82□□□□□ -0.04
CLK1P49759 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.82□□□□□ -0.04
CLK1P49759 AC093724.1-201ENST00000448659 1027 ntBASIC14.82□□□□□ -0.04
CLK1P49759 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms