Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 IGHV3-62-201ENST00000520057 340 ntBASIC14.01□□□□□ -0.17
SRP9P49458 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.01□□□□□ -0.17
SRP9P49458 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SRP9P49458 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.01□□□□□ -0.17
SRP9P49458 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SRP9P49458 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SRP9P49458 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.01□□□□□ -0.17
SRP9P49458 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.01□□□□□ -0.17
SRP9P49458 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.01□□□□□ -0.17
SRP9P49458 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SRP9P49458 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SRP9P49458 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SRP9P49458 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14□□□□□ -0.17
SRP9P49458 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SRP9P49458 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SRP9P49458 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14□□□□□ -0.17
SRP9P49458 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14□□□□□ -0.17
SRP9P49458 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14□□□□□ -0.17
SRP9P49458 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
SRP9P49458 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
SRP9P49458 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14□□□□□ -0.17
SRP9P49458 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14□□□□□ -0.17
SRP9P49458 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14□□□□□ -0.17
SRP9P49458 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14□□□□□ -0.17
SRP9P49458 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14□□□□□ -0.17
SRP9P49458 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SRP9P49458 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14□□□□□ -0.17
SRP9P49458 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SRP9P49458 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SRP9P49458 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 MIR600HG-201ENST00000449175 5984 ntBASIC14□□□□□ -0.17
SRP9P49458 AC079781.5-202ENST00000641784 3743 ntBASIC14□□□□□ -0.17
SRP9P49458 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SRP9P49458 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14□□□□□ -0.17
SRP9P49458 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14□□□□□ -0.17
SRP9P49458 AC090616.6-203ENST00000579186 1945 ntBASIC14□□□□□ -0.17
SRP9P49458 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.99□□□□□ -0.17
SRP9P49458 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SRP9P49458 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
SRP9P49458 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.99□□□□□ -0.17
SRP9P49458 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SRP9P49458 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.99□□□□□ -0.17
SRP9P49458 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SRP9P49458 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SRP9P49458 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRP9P49458 ADH5P3-201ENST00000433842 1137 ntBASIC13.99□□□□□ -0.17
SRP9P49458 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.99□□□□□ -0.17
SRP9P49458 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.99□□□□□ -0.17
SRP9P49458 AC004967.1-201ENST00000453589 447 ntBASIC13.99□□□□□ -0.17
SRP9P49458 AP000344.2-201ENST00000512987 629 ntBASIC13.99□□□□□ -0.17
SRP9P49458 PRYP6-201ENST00000514804 343 ntBASIC13.99□□□□□ -0.17
SRP9P49458 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.99□□□□□ -0.17
SRP9P49458 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.99□□□□□ -0.17
SRP9P49458 KRT8P23-201ENST00000560090 1207 ntBASIC13.99□□□□□ -0.17
SRP9P49458 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms