Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.29■□□□□ 0.36
CENPFP49454 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 AC011270.2-201ENST00000624293 2550 ntBASIC17.29■□□□□ 0.36
CENPFP49454 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CENPFP49454 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
CENPFP49454 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.29■□□□□ 0.36
CENPFP49454 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.29■□□□□ 0.36
CENPFP49454 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CENPFP49454 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CENPFP49454 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.29■□□□□ 0.36
CENPFP49454 PCDHB19P-201ENST00000570871 2371 ntBASIC17.28■□□□□ 0.36
CENPFP49454 AC011742.3-201ENST00000439053 820 ntBASIC17.28■□□□□ 0.36
CENPFP49454 AC021723.1-201ENST00000486306 515 ntBASIC17.28■□□□□ 0.36
CENPFP49454 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.28■□□□□ 0.36
CENPFP49454 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CENPFP49454 AC106820.3-201ENST00000561653 397 ntBASIC17.28■□□□□ 0.36
CENPFP49454 DGAT2L7P-201ENST00000602462 744 ntBASIC17.28■□□□□ 0.36
CENPFP49454 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.28■□□□□ 0.36
CENPFP49454 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CENPFP49454 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.28■□□□□ 0.36
CENPFP49454 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.28■□□□□ 0.36
CENPFP49454 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CENPFP49454 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.28■□□□□ 0.36
CENPFP49454 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.28■□□□□ 0.36
CENPFP49454 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.28■□□□□ 0.36
CENPFP49454 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.28■□□□□ 0.36
CENPFP49454 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 AL136309.1-201ENST00000403917 691 ntBASIC17.28■□□□□ 0.36
CENPFP49454 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.28■□□□□ 0.36
CENPFP49454 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.28■□□□□ 0.36
CENPFP49454 AC104073.2-201ENST00000453737 312 ntBASIC17.28■□□□□ 0.36
CENPFP49454 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CENPFP49454 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.28■□□□□ 0.36
CENPFP49454 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CENPFP49454 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CENPFP49454 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CENPFP49454 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CENPFP49454 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CENPFP49454 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CENPFP49454 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CENPFP49454 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.27■□□□□ 0.36
CENPFP49454 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CENPFP49454 AC105137.3-201ENST00000617588 984 ntBASIC17.27■□□□□ 0.36
CENPFP49454 REXO1L5P-201ENST00000622260 2098 ntBASIC17.27■□□□□ 0.36
CENPFP49454 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.27■□□□□ 0.36
CENPFP49454 AC006449.6-201ENST00000612330 2296 ntBASIC17.27■□□□□ 0.36
CENPFP49454 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CENPFP49454 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CENPFP49454 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CENPFP49454 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CENPFP49454 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CENPFP49454 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CENPFP49454 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.27■□□□□ 0.36
CENPFP49454 PHKG1P2-201ENST00000457537 863 ntBASIC17.27■□□□□ 0.36
CENPFP49454 AC106794.1-201ENST00000506935 792 ntBASIC17.27■□□□□ 0.36
CENPFP49454 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.27■□□□□ 0.36
CENPFP49454 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CENPFP49454 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.27■□□□□ 0.36
CENPFP49454 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.27■□□□□ 0.36
CENPFP49454 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
CENPFP49454 AC020922.3-201ENST00000595064 547 ntBASIC17.27■□□□□ 0.36
CENPFP49454 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.27■□□□□ 0.36
CENPFP49454 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CENPFP49454 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CENPFP49454 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CENPFP49454 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CENPFP49454 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CENPFP49454 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CENPFP49454 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
CENPFP49454 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CENPFP49454 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CENPFP49454 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
CENPFP49454 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.26■□□□□ 0.35
CENPFP49454 AL162426.1-201ENST00000624141 743 ntBASIC17.26■□□□□ 0.35
CENPFP49454 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CENPFP49454 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms