Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.09■□□□□ 0.65
PDE6BP35913 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PDE6BP35913 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PDE6BP35913 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 CRCP-204ENST00000398684 492 ntTSL 2 BASIC19.09■□□□□ 0.65
PDE6BP35913 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 FTLP1-201ENST00000449155 526 ntBASIC19.09■□□□□ 0.65
PDE6BP35913 AC005740.2-201ENST00000511085 419 ntBASIC19.09■□□□□ 0.65
PDE6BP35913 AC134698.3-201ENST00000523880 214 ntBASIC19.09■□□□□ 0.65
PDE6BP35913 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.09■□□□□ 0.65
PDE6BP35913 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.09■□□□□ 0.65
PDE6BP35913 AC005730.2-201ENST00000564549 1184 ntBASIC19.09■□□□□ 0.65
PDE6BP35913 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC19.09■□□□□ 0.65
PDE6BP35913 AL353726.2-201ENST00000623259 884 ntBASIC19.09■□□□□ 0.65
PDE6BP35913 AP001002.3-201ENST00000623482 206 ntBASIC19.09■□□□□ 0.65
PDE6BP35913 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PDE6BP35913 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PDE6BP35913 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PDE6BP35913 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.09■□□□□ 0.65
PDE6BP35913 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
PDE6BP35913 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 AC007787.1-201ENST00000588095 1583 ntBASIC19.09■□□□□ 0.65
PDE6BP35913 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
PDE6BP35913 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.09■□□□□ 0.65
PDE6BP35913 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PDE6BP35913 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.09■□□□□ 0.65
PDE6BP35913 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6BP35913 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6BP35913 AC092171.3-201ENST00000610122 2651 ntBASIC19.08■□□□□ 0.65
PDE6BP35913 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
PDE6BP35913 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6BP35913 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6BP35913 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6BP35913 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6BP35913 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6BP35913 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6BP35913 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6BP35913 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6BP35913 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6BP35913 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6BP35913 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6BP35913 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6BP35913 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6BP35913 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6BP35913 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6BP35913 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PDE6BP35913 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.08■□□□□ 0.64
PDE6BP35913 AL354877.1-201ENST00000424412 413 ntBASIC19.08■□□□□ 0.64
PDE6BP35913 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.08■□□□□ 0.64
PDE6BP35913 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.08■□□□□ 0.64
PDE6BP35913 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6BP35913 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.08■□□□□ 0.64
PDE6BP35913 AC022217.1-201ENST00000521069 738 ntBASIC19.08■□□□□ 0.64
PDE6BP35913 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.08■□□□□ 0.64
PDE6BP35913 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.08■□□□□ 0.64
PDE6BP35913 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.08■□□□□ 0.64
PDE6BP35913 FGFR3P5-201ENST00000564496 886 ntBASIC19.08■□□□□ 0.64
PDE6BP35913 MIR3907-201ENST00000579424 151 ntBASIC19.08■□□□□ 0.64
PDE6BP35913 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
PDE6BP35913 AL023803.2-201ENST00000620080 638 ntBASIC19.08■□□□□ 0.64
PDE6BP35913 AC100757.4-201ENST00000626934 759 ntBASIC19.08■□□□□ 0.64
PDE6BP35913 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
PDE6BP35913 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6BP35913 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6BP35913 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PDE6BP35913 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6BP35913 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6BP35913 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6BP35913 KRT8P4-201ENST00000509735 1454 ntBASIC19.08■□□□□ 0.64
PDE6BP35913 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.08■□□□□ 0.64
PDE6BP35913 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6BP35913 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PDE6BP35913 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.07■□□□□ 0.64
PDE6BP35913 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.07■□□□□ 0.64
PDE6BP35913 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.07■□□□□ 0.64
PDE6BP35913 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PDE6BP35913 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.07■□□□□ 0.64
PDE6BP35913 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.07■□□□□ 0.64
PDE6BP35913 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms