Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 TNRC18P3-201ENST00000441896 2691 ntBASIC16.83■□□□□ 0.28
HOXC8P31273 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC8P31273 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HOXC8P31273 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
HOXC8P31273 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
HOXC8P31273 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HOXC8P31273 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOXC8P31273 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC8P31273 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC8P31273 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HOXC8P31273 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC8P31273 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HOXC8P31273 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXC8P31273 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.82■□□□□ 0.28
HOXC8P31273 MESTP3-201ENST00000503460 968 ntBASIC16.82■□□□□ 0.28
HOXC8P31273 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HOXC8P31273 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC8P31273 AC004466.1-201ENST00000599515 1080 ntBASIC16.82■□□□□ 0.28
HOXC8P31273 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.82■□□□□ 0.28
HOXC8P31273 AC138466.3-201ENST00000619983 221 ntBASIC16.82■□□□□ 0.28
HOXC8P31273 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HOXC8P31273 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC8P31273 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC8P31273 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC8P31273 AC092127.1-201ENST00000567093 3455 ntBASIC16.82■□□□□ 0.28
HOXC8P31273 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
HOXC8P31273 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 CLUHP2-201ENST00000426660 1303 ntBASIC16.81■□□□□ 0.28
HOXC8P31273 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC8P31273 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC8P31273 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC8P31273 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXC8P31273 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC8P31273 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC8P31273 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXC8P31273 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXC8P31273 HIST2H2BC-201ENST00000498492 580 ntBASIC16.81■□□□□ 0.28
HOXC8P31273 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC8P31273 AC020914.3-201ENST00000594712 304 ntBASIC16.81■□□□□ 0.28
HOXC8P31273 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC8P31273 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC8P31273 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC8P31273 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HOXC8P31273 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
HOXC8P31273 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC8P31273 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC8P31273 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC8P31273 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC8P31273 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC8P31273 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC8P31273 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC8P31273 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC8P31273 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC8P31273 AL136309.1-201ENST00000403917 691 ntBASIC16.8■□□□□ 0.28
HOXC8P31273 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
HOXC8P31273 HIST2H2BB-201ENST00000449108 381 ntBASIC16.8■□□□□ 0.28
HOXC8P31273 IGHJ2P-201ENST00000454480 60 ntBASIC16.8■□□□□ 0.28
HOXC8P31273 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC8P31273 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC8P31273 RHOQP1-201ENST00000555758 579 ntBASIC16.8■□□□□ 0.28
HOXC8P31273 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC8P31273 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC8P31273 AC106872.11-201ENST00000605838 421 ntBASIC16.8■□□□□ 0.28
HOXC8P31273 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms