Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RXRBP28702 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.99■□□□□ 0.79
RXRBP28702 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RXRBP28702 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 AC026471.1-201ENST00000564629 3026 ntBASIC19.99■□□□□ 0.79
RXRBP28702 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.99■□□□□ 0.79
RXRBP28702 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RXRBP28702 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 NHP2P1-201ENST00000335274 462 ntBASIC19.99■□□□□ 0.79
RXRBP28702 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC19.99■□□□□ 0.79
RXRBP28702 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC19.99■□□□□ 0.79
RXRBP28702 CDC23-208ENST00000505120 455 ntTSL 3 BASIC19.99■□□□□ 0.79
RXRBP28702 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC19.99■□□□□ 0.79
RXRBP28702 ABHD17AP9-201ENST00000561925 548 ntBASIC19.99■□□□□ 0.79
RXRBP28702 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.99■□□□□ 0.79
RXRBP28702 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RXRBP28702 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRBP28702 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC19.99■□□□□ 0.79
RXRBP28702 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 AC136759.1-202ENST00000530858 2194 ntBASIC19.98■□□□□ 0.79
RXRBP28702 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.98■□□□□ 0.79
RXRBP28702 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RXRBP28702 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC19.98■□□□□ 0.79
RXRBP28702 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RXRBP28702 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RXRBP28702 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC19.98■□□□□ 0.79
RXRBP28702 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC19.98■□□□□ 0.79
RXRBP28702 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RXRBP28702 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RXRBP28702 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.98■□□□□ 0.79
RXRBP28702 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRBP28702 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RXRBP28702 AC244394.1-201ENST00000435000 1665 ntBASIC19.97■□□□□ 0.79
RXRBP28702 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RXRBP28702 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RXRBP28702 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.97■□□□□ 0.79
RXRBP28702 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 MBP-201ENST00000354542 575 ntTSL 2 BASIC19.97■□□□□ 0.79
RXRBP28702 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.97■□□□□ 0.79
RXRBP28702 MIR566-201ENST00000385187 94 ntBASIC19.97■□□□□ 0.79
RXRBP28702 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC19.97■□□□□ 0.79
RXRBP28702 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC19.97■□□□□ 0.79
RXRBP28702 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RXRBP28702 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC19.97■□□□□ 0.79
RXRBP28702 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC19.97■□□□□ 0.79
RXRBP28702 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC19.97■□□□□ 0.79
RXRBP28702 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC19.97■□□□□ 0.79
RXRBP28702 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RXRBP28702 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.97■□□□□ 0.79
RXRBP28702 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 AC055811.4-201ENST00000624039 1754 ntBASIC19.97■□□□□ 0.79
RXRBP28702 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RXRBP28702 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms