Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.46■□□□□ 0.23
MMP8P22894 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.46■□□□□ 0.23
MMP8P22894 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
MMP8P22894 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.46■□□□□ 0.23
MMP8P22894 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MMP8P22894 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
MMP8P22894 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MMP8P22894 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.46■□□□□ 0.22
MMP8P22894 CICP11-201ENST00000434745 2827 ntBASIC16.46■□□□□ 0.22
MMP8P22894 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
MMP8P22894 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.45■□□□□ 0.22
MMP8P22894 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MMP8P22894 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
MMP8P22894 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
MMP8P22894 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
MMP8P22894 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 TCAF2P1-201ENST00000291129 2421 ntBASIC16.45■□□□□ 0.22
MMP8P22894 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP8P22894 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP8P22894 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.45■□□□□ 0.22
MMP8P22894 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.45■□□□□ 0.22
MMP8P22894 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP8P22894 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.45■□□□□ 0.22
MMP8P22894 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.45■□□□□ 0.22
MMP8P22894 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP8P22894 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 AC008738.7-201ENST00000609744 511 ntBASIC16.45■□□□□ 0.22
MMP8P22894 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP8P22894 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
MMP8P22894 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.45■□□□□ 0.22
MMP8P22894 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MMP8P22894 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.45■□□□□ 0.22
MMP8P22894 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MMP8P22894 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.44■□□□□ 0.22
MMP8P22894 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MMP8P22894 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MMP8P22894 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 MROH4P-201ENST00000431302 1578 ntBASIC16.44■□□□□ 0.22
MMP8P22894 AC022144.1-201ENST00000602255 1580 ntBASIC16.44■□□□□ 0.22
MMP8P22894 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MMP8P22894 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
MMP8P22894 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
MMP8P22894 PMS2P2-201ENST00000425039 1128 ntBASIC16.44■□□□□ 0.22
MMP8P22894 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.44■□□□□ 0.22
MMP8P22894 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.44■□□□□ 0.22
MMP8P22894 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MMP8P22894 TIMM17BP1-201ENST00000545713 516 ntBASIC16.44■□□□□ 0.22
MMP8P22894 AC000095.1-201ENST00000603208 874 ntBASIC16.44■□□□□ 0.22
MMP8P22894 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
MMP8P22894 AC004840.1-201ENST00000636359 365 ntBASIC16.44■□□□□ 0.22
MMP8P22894 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.44■□□□□ 0.22
MMP8P22894 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
MMP8P22894 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.44■□□□□ 0.22
MMP8P22894 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MMP8P22894 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms