Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMPD1P17405 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SMPD1P17405 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.24■□□□□ 0.35
SMPD1P17405 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SMPD1P17405 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMPD1P17405 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.24■□□□□ 0.35
SMPD1P17405 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.24■□□□□ 0.35
SMPD1P17405 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SMPD1P17405 OR6D1P-203ENST00000641209 4860 ntBASIC17.24■□□□□ 0.35
SMPD1P17405 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
SMPD1P17405 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.24■□□□□ 0.35
SMPD1P17405 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.24■□□□□ 0.35
SMPD1P17405 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.24■□□□□ 0.35
SMPD1P17405 AKR7A2P1-201ENST00000460134 915 ntBASIC17.24■□□□□ 0.35
SMPD1P17405 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.24■□□□□ 0.35
SMPD1P17405 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.24■□□□□ 0.35
SMPD1P17405 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.24■□□□□ 0.35
SMPD1P17405 ACTG1P17-201ENST00000558391 1119 ntBASIC17.24■□□□□ 0.35
SMPD1P17405 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.24■□□□□ 0.35
SMPD1P17405 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.24■□□□□ 0.35
SMPD1P17405 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 AC244452.3-201ENST00000636814 210 ntBASIC17.24■□□□□ 0.35
SMPD1P17405 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.24■□□□□ 0.35
SMPD1P17405 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SMPD1P17405 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SMPD1P17405 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMPD1P17405 AL023775.1-201ENST00000454907 1746 ntBASIC17.24■□□□□ 0.35
SMPD1P17405 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.23■□□□□ 0.35
SMPD1P17405 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SMPD1P17405 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.23■□□□□ 0.35
SMPD1P17405 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 KRT8P14-201ENST00000414254 1442 ntBASIC17.23■□□□□ 0.35
SMPD1P17405 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.23■□□□□ 0.35
SMPD1P17405 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.23■□□□□ 0.35
SMPD1P17405 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SMPD1P17405 AL645937.2-201ENST00000396808 931 ntBASIC17.23■□□□□ 0.35
SMPD1P17405 MIR663B-201ENST00000408361 115 ntBASIC17.23■□□□□ 0.35
SMPD1P17405 AC004945.1-201ENST00000416738 983 ntBASIC17.23■□□□□ 0.35
SMPD1P17405 EIF3FP3-201ENST00000434851 1086 ntBASIC17.23■□□□□ 0.35
SMPD1P17405 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 IGHJ2P-201ENST00000454480 60 ntBASIC17.23■□□□□ 0.35
SMPD1P17405 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.23■□□□□ 0.35
SMPD1P17405 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMPD1P17405 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMPD1P17405 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.23■□□□□ 0.35
SMPD1P17405 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.23■□□□□ 0.35
SMPD1P17405 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SMPD1P17405 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.23■□□□□ 0.35
SMPD1P17405 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 AP003680.1-201ENST00000598970 3660 ntBASIC17.23■□□□□ 0.35
SMPD1P17405 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMPD1P17405 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SMPD1P17405 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SMPD1P17405 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMPD1P17405 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.23■□□□□ 0.35
SMPD1P17405 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SMPD1P17405 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMPD1P17405 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.22■□□□□ 0.35
SMPD1P17405 AC006449.5-201ENST00000610658 2098 ntBASIC17.22■□□□□ 0.35
SMPD1P17405 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMPD1P17405 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.22■□□□□ 0.35
SMPD1P17405 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.22■□□□□ 0.35
SMPD1P17405 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMPD1P17405 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SMPD1P17405 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms