Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.47■□□□□ 0.23
PDGFRAP16234 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.47■□□□□ 0.23
PDGFRAP16234 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.47■□□□□ 0.23
PDGFRAP16234 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.47■□□□□ 0.23
PDGFRAP16234 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.47■□□□□ 0.23
PDGFRAP16234 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.47■□□□□ 0.23
PDGFRAP16234 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.47■□□□□ 0.23
PDGFRAP16234 AC074044.1-201ENST00000609673 707 ntBASIC16.47■□□□□ 0.23
PDGFRAP16234 AF228730.6-201ENST00000641497 218 ntBASIC16.47■□□□□ 0.23
PDGFRAP16234 AC084121.3-201ENST00000641716 218 ntBASIC16.47■□□□□ 0.23
PDGFRAP16234 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PDGFRAP16234 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.47■□□□□ 0.23
PDGFRAP16234 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.47■□□□□ 0.23
PDGFRAP16234 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.46■□□□□ 0.23
PDGFRAP16234 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PDGFRAP16234 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.46■□□□□ 0.23
PDGFRAP16234 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.46■□□□□ 0.23
PDGFRAP16234 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.46■□□□□ 0.23
PDGFRAP16234 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PDGFRAP16234 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 AC236430.1-201ENST00000402231 743 ntBASIC16.46■□□□□ 0.23
PDGFRAP16234 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.46■□□□□ 0.23
PDGFRAP16234 KRT18P64-201ENST00000434946 1219 ntBASIC16.46■□□□□ 0.23
PDGFRAP16234 AC009477.1-201ENST00000452936 217 ntBASIC16.46■□□□□ 0.23
PDGFRAP16234 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.46■□□□□ 0.23
PDGFRAP16234 SLED1-202ENST00000512051 380 ntBASIC16.46■□□□□ 0.23
PDGFRAP16234 ZNF890P-202ENST00000530367 1156 ntBASIC16.46■□□□□ 0.23
PDGFRAP16234 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.46■□□□□ 0.23
PDGFRAP16234 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.46■□□□□ 0.23
PDGFRAP16234 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.46■□□□□ 0.23
PDGFRAP16234 LINC01115-203ENST00000606068 577 ntBASIC16.46■□□□□ 0.23
PDGFRAP16234 LINC02084-201ENST00000606069 1096 ntBASIC16.46■□□□□ 0.23
PDGFRAP16234 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.46■□□□□ 0.23
PDGFRAP16234 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.46■□□□□ 0.23
PDGFRAP16234 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PDGFRAP16234 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PDGFRAP16234 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.46■□□□□ 0.23
PDGFRAP16234 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PDGFRAP16234 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PDGFRAP16234 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PDGFRAP16234 AC104640.1-201ENST00000562617 2109 ntBASIC16.46■□□□□ 0.23
PDGFRAP16234 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.46■□□□□ 0.23
PDGFRAP16234 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.46■□□□□ 0.23
PDGFRAP16234 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDGFRAP16234 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.46■□□□□ 0.23
PDGFRAP16234 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PDGFRAP16234 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
PDGFRAP16234 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PDGFRAP16234 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PDGFRAP16234 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFRAP16234 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFRAP16234 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.45■□□□□ 0.22
PDGFRAP16234 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PDGFRAP16234 RPL13P2-201ENST00000440687 659 ntBASIC16.45■□□□□ 0.22
PDGFRAP16234 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PDGFRAP16234 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.45■□□□□ 0.22
PDGFRAP16234 AC009407.1-201ENST00000568958 598 ntBASIC16.45■□□□□ 0.22
PDGFRAP16234 RN7SL204P-201ENST00000582831 262 ntBASIC16.45■□□□□ 0.22
PDGFRAP16234 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms