Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.84□□□□□ -0.35
DEFA4P12838 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
DEFA4P12838 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
DEFA4P12838 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
DEFA4P12838 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
DEFA4P12838 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.84□□□□□ -0.35
DEFA4P12838 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.84□□□□□ -0.35
DEFA4P12838 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
DEFA4P12838 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
DEFA4P12838 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
DEFA4P12838 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.83□□□□□ -0.35
DEFA4P12838 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
DEFA4P12838 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
DEFA4P12838 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.83□□□□□ -0.35
DEFA4P12838 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.83□□□□□ -0.35
DEFA4P12838 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.83□□□□□ -0.36
DEFA4P12838 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.83□□□□□ -0.36
DEFA4P12838 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.83□□□□□ -0.36
DEFA4P12838 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.83□□□□□ -0.36
DEFA4P12838 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
DEFA4P12838 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.83□□□□□ -0.36
DEFA4P12838 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.83□□□□□ -0.36
DEFA4P12838 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.83□□□□□ -0.36
DEFA4P12838 RARRES2P8-201ENST00000566335 367 ntBASIC12.83□□□□□ -0.36
DEFA4P12838 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
DEFA4P12838 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.83□□□□□ -0.36
DEFA4P12838 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
DEFA4P12838 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.83□□□□□ -0.36
DEFA4P12838 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
DEFA4P12838 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DEFA4P12838 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.83□□□□□ -0.36
DEFA4P12838 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.82□□□□□ -0.36
DEFA4P12838 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
DEFA4P12838 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.82□□□□□ -0.36
DEFA4P12838 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.82□□□□□ -0.36
DEFA4P12838 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
DEFA4P12838 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.82□□□□□ -0.36
DEFA4P12838 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
DEFA4P12838 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
DEFA4P12838 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
DEFA4P12838 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
DEFA4P12838 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
DEFA4P12838 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
DEFA4P12838 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.82□□□□□ -0.36
DEFA4P12838 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.82□□□□□ -0.36
DEFA4P12838 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.82□□□□□ -0.36
DEFA4P12838 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.82□□□□□ -0.36
DEFA4P12838 FAM86C2P-203ENST00000528684 1004 ntBASIC12.82□□□□□ -0.36
DEFA4P12838 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA4P12838 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms