Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
THRAP10827 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
THRAP10827 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
THRAP10827 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
THRAP10827 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
THRAP10827 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
THRAP10827 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.81■□□□□ 0.12
THRAP10827 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.81■□□□□ 0.12
THRAP10827 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
THRAP10827 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
THRAP10827 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
THRAP10827 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
THRAP10827 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
THRAP10827 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
THRAP10827 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
THRAP10827 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
THRAP10827 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.81■□□□□ 0.12
THRAP10827 AC015922.1-201ENST00000421102 1152 ntBASIC15.81■□□□□ 0.12
THRAP10827 TSSK5P-201ENST00000423978 907 ntBASIC15.81■□□□□ 0.12
THRAP10827 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.81■□□□□ 0.12
THRAP10827 AL353705.2-201ENST00000428243 662 ntBASIC15.81■□□□□ 0.12
THRAP10827 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.81■□□□□ 0.12
THRAP10827 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.81■□□□□ 0.12
THRAP10827 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
THRAP10827 AL035456.1-201ENST00000456064 1369 ntBASIC15.81■□□□□ 0.12
THRAP10827 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
THRAP10827 HLA-V-204ENST00000476601 1289 ntBASIC15.81■□□□□ 0.12
THRAP10827 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
THRAP10827 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.81■□□□□ 0.12
THRAP10827 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
THRAP10827 AL138828.2-201ENST00000615812 383 ntBASIC15.81■□□□□ 0.12
THRAP10827 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.81■□□□□ 0.12
THRAP10827 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.81■□□□□ 0.12
THRAP10827 AF228730.6-201ENST00000641497 218 ntBASIC15.81■□□□□ 0.12
THRAP10827 AC084121.3-201ENST00000641716 218 ntBASIC15.81■□□□□ 0.12
THRAP10827 AC105233.6-201ENST00000642093 218 ntBASIC15.81■□□□□ 0.12
THRAP10827 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
THRAP10827 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.81■□□□□ 0.12
THRAP10827 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.8■□□□□ 0.12
THRAP10827 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
THRAP10827 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.8■□□□□ 0.12
THRAP10827 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.8■□□□□ 0.12
THRAP10827 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.8■□□□□ 0.12
THRAP10827 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.8■□□□□ 0.12
THRAP10827 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.8■□□□□ 0.12
THRAP10827 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.8■□□□□ 0.12
THRAP10827 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
THRAP10827 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 AC098859.1-201ENST00000502915 1238 ntBASIC15.8■□□□□ 0.12
THRAP10827 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.8■□□□□ 0.12
THRAP10827 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.8■□□□□ 0.12
THRAP10827 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.8■□□□□ 0.12
THRAP10827 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.8■□□□□ 0.12
THRAP10827 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.8■□□□□ 0.12
THRAP10827 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.8■□□□□ 0.12
THRAP10827 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
THRAP10827 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.8■□□□□ 0.12
THRAP10827 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
THRAP10827 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.8■□□□□ 0.12
THRAP10827 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
THRAP10827 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.8■□□□□ 0.12
THRAP10827 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
THRAP10827 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.79■□□□□ 0.12
THRAP10827 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.79■□□□□ 0.12
THRAP10827 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.79■□□□□ 0.12
THRAP10827 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
THRAP10827 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
THRAP10827 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.79■□□□□ 0.12
THRAP10827 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.79■□□□□ 0.12
THRAP10827 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 MIR600HG-201ENST00000449175 5984 ntBASIC15.79■□□□□ 0.12
THRAP10827 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THRAP10827 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.79■□□□□ 0.12
THRAP10827 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms