Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 OR8S1-201ENST00000310194 1080 ntBASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 AC007389.4-201ENST00000454674 793 ntBASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SRGAP2CP0DJJ0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SRGAP2CP0DJJ0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SRGAP2CP0DJJ0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.21■□□□□ 0.34
SRGAP2CP0DJJ0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
SRGAP2CP0DJJ0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SRGAP2CP0DJJ0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 AC015910.1-201ENST00000579400 975 ntBASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRGAP2CP0DJJ0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 C1QBPP1-201ENST00000400117 770 ntBASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 AL162726.2-201ENST00000438986 1017 ntBASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 AC244107.1-201ENST00000442033 332 ntBASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 AC120045.2-201ENST00000567334 178 ntBASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 AC008741.2-201ENST00000612792 3115 ntBASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRGAP2CP0DJJ0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms