Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.25■□□□□ 0.19
CD48P09326 AC006058.4-201ENST00000624016 1670 ntBASIC16.25■□□□□ 0.19
CD48P09326 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CD48P09326 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.25■□□□□ 0.19
CD48P09326 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CD48P09326 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.25■□□□□ 0.19
CD48P09326 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.25■□□□□ 0.19
CD48P09326 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.25■□□□□ 0.19
CD48P09326 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.25■□□□□ 0.19
CD48P09326 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CD48P09326 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 AL844908.2-201ENST00000609461 460 ntBASIC16.25■□□□□ 0.19
CD48P09326 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.25■□□□□ 0.19
CD48P09326 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.25■□□□□ 0.19
CD48P09326 AL109936.8-201ENST00000641772 604 ntBASIC16.25■□□□□ 0.19
CD48P09326 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CD48P09326 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CD48P09326 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 AC148477.4-201ENST00000613430 1793 ntBASIC16.25■□□□□ 0.19
CD48P09326 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.25■□□□□ 0.19
CD48P09326 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.25■□□□□ 0.19
CD48P09326 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CD48P09326 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD48P09326 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.25■□□□□ 0.19
CD48P09326 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.24■□□□□ 0.19
CD48P09326 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CD48P09326 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CD48P09326 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CD48P09326 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CD48P09326 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.24■□□□□ 0.19
CD48P09326 FER1L4-210ENST00000615531 5998 ntBASIC16.24■□□□□ 0.19
CD48P09326 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CD48P09326 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CD48P09326 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.24■□□□□ 0.19
CD48P09326 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.24■□□□□ 0.19
CD48P09326 RPL13P2-201ENST00000440687 659 ntBASIC16.24■□□□□ 0.19
CD48P09326 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.24■□□□□ 0.19
CD48P09326 FAM86GP-201ENST00000448322 971 ntBASIC16.24■□□□□ 0.19
CD48P09326 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.24■□□□□ 0.19
CD48P09326 RN7SL618P-201ENST00000477850 296 ntBASIC16.24■□□□□ 0.19
CD48P09326 SLED1-202ENST00000512051 380 ntBASIC16.24■□□□□ 0.19
CD48P09326 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.24■□□□□ 0.19
CD48P09326 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.24■□□□□ 0.19
CD48P09326 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.24■□□□□ 0.19
CD48P09326 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.24■□□□□ 0.19
CD48P09326 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.24■□□□□ 0.19
CD48P09326 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.24■□□□□ 0.19
CD48P09326 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
CD48P09326 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.24■□□□□ 0.19
CD48P09326 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CD48P09326 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.24■□□□□ 0.19
CD48P09326 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.24■□□□□ 0.19
CD48P09326 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.24■□□□□ 0.19
CD48P09326 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
CD48P09326 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CD48P09326 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CD48P09326 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.23■□□□□ 0.19
CD48P09326 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CD48P09326 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD48P09326 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.23■□□□□ 0.19
CD48P09326 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD48P09326 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD48P09326 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD48P09326 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD48P09326 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD48P09326 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.23■□□□□ 0.19
CD48P09326 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD48P09326 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD48P09326 AC100757.3-201ENST00000622361 1406 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms