Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TPM3P06753 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.66■□□□□ 0.42
TPM3P06753 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM3P06753 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
TPM3P06753 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM3P06753 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TPM3P06753 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM3P06753 AP002414.3-201ENST00000589352 1468 ntBASIC17.65■□□□□ 0.42
TPM3P06753 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM3P06753 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.65■□□□□ 0.42
TPM3P06753 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.65■□□□□ 0.42
TPM3P06753 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.65■□□□□ 0.42
TPM3P06753 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.65■□□□□ 0.42
TPM3P06753 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.65■□□□□ 0.42
TPM3P06753 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TPM3P06753 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.65■□□□□ 0.42
TPM3P06753 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TPM3P06753 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.65■□□□□ 0.42
TPM3P06753 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.65■□□□□ 0.42
TPM3P06753 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.65■□□□□ 0.42
TPM3P06753 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM3P06753 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TPM3P06753 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TPM3P06753 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.65■□□□□ 0.42
TPM3P06753 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM3P06753 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.65■□□□□ 0.42
TPM3P06753 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.65■□□□□ 0.42
TPM3P06753 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.65■□□□□ 0.42
TPM3P06753 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.64■□□□□ 0.42
TPM3P06753 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TPM3P06753 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TPM3P06753 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
TPM3P06753 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TPM3P06753 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TPM3P06753 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.64■□□□□ 0.41
TPM3P06753 AC023024.2-201ENST00000623561 1993 ntBASIC17.64■□□□□ 0.41
TPM3P06753 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
TPM3P06753 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TPM3P06753 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM3P06753 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM3P06753 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM3P06753 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TPM3P06753 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TPM3P06753 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
TPM3P06753 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM3P06753 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM3P06753 KRT18P35-201ENST00000510488 1269 ntBASIC17.64■□□□□ 0.41
TPM3P06753 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
TPM3P06753 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.64■□□□□ 0.41
TPM3P06753 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.64■□□□□ 0.41
TPM3P06753 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TPM3P06753 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TPM3P06753 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM3P06753 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TPM3P06753 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.64■□□□□ 0.41
TPM3P06753 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.64■□□□□ 0.41
TPM3P06753 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM3P06753 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM3P06753 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM3P06753 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM3P06753 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 AC009090.5-201ENST00000624886 2285 ntBASIC17.63■□□□□ 0.41
TPM3P06753 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM3P06753 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM3P06753 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM3P06753 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.63■□□□□ 0.41
TPM3P06753 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TPM3P06753 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.63■□□□□ 0.41
TPM3P06753 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM3P06753 AL645939.2-201ENST00000427340 991 ntBASIC17.63■□□□□ 0.41
TPM3P06753 UPK3BP1-201ENST00000428678 509 ntBASIC17.63■□□□□ 0.41
TPM3P06753 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms