Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHRNA1P02708 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA1P02708 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNA1P02708 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA1P02708 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNA1P02708 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNA1P02708 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA1P02708 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA1P02708 BTBD6P1-201ENST00000412176 1267 ntBASIC16.89■□□□□ 0.29
CHRNA1P02708 NUS1P3-201ENST00000423502 862 ntBASIC16.89■□□□□ 0.29
CHRNA1P02708 HOMER2P2-201ENST00000451621 847 ntBASIC16.89■□□□□ 0.29
CHRNA1P02708 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRNA1P02708 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.89■□□□□ 0.29
CHRNA1P02708 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.89■□□□□ 0.29
CHRNA1P02708 AL022328.3-201ENST00000607943 679 ntBASIC16.89■□□□□ 0.29
CHRNA1P02708 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CHRNA1P02708 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA1P02708 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHRNA1P02708 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA1P02708 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRNA1P02708 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CHRNA1P02708 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA1P02708 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CHRNA1P02708 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA1P02708 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRNA1P02708 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA1P02708 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA1P02708 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CHRNA1P02708 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA1P02708 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA1P02708 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA1P02708 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHRNA1P02708 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CHRNA1P02708 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.88■□□□□ 0.29
CHRNA1P02708 RPSAP36-202ENST00000494591 1261 ntBASIC16.88■□□□□ 0.29
CHRNA1P02708 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.88■□□□□ 0.29
CHRNA1P02708 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA1P02708 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CHRNA1P02708 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CHRNA1P02708 RN7SL48P-201ENST00000579283 293 ntBASIC16.88■□□□□ 0.29
CHRNA1P02708 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.88■□□□□ 0.29
CHRNA1P02708 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.88■□□□□ 0.29
CHRNA1P02708 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CHRNA1P02708 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.88■□□□□ 0.29
CHRNA1P02708 AC007787.1-201ENST00000588095 1583 ntBASIC16.88■□□□□ 0.29
CHRNA1P02708 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CHRNA1P02708 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA1P02708 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CHRNA1P02708 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA1P02708 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA1P02708 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.87■□□□□ 0.29
CHRNA1P02708 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CHRNA1P02708 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CHRNA1P02708 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.87■□□□□ 0.29
CHRNA1P02708 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CHRNA1P02708 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.87■□□□□ 0.29
CHRNA1P02708 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CHRNA1P02708 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.87■□□□□ 0.29
CHRNA1P02708 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHRNA1P02708 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.87■□□□□ 0.29
CHRNA1P02708 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.87■□□□□ 0.29
CHRNA1P02708 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.87■□□□□ 0.29
CHRNA1P02708 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.87■□□□□ 0.29
CHRNA1P02708 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.87■□□□□ 0.29
CHRNA1P02708 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHRNA1P02708 AC005695.3-201ENST00000614522 232 ntBASIC16.87■□□□□ 0.29
CHRNA1P02708 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.87■□□□□ 0.29
CHRNA1P02708 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms