Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.1■□□□□ 0.17
MT-CO1P00395 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.1■□□□□ 0.17
MT-CO1P00395 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
MT-CO1P00395 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
MT-CO1P00395 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-CO1P00395 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.1■□□□□ 0.17
MT-CO1P00395 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.1■□□□□ 0.17
MT-CO1P00395 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-CO1P00395 MEIS3P1-201ENST00000495167 958 ntBASIC16.1■□□□□ 0.17
MT-CO1P00395 AC093004.1-201ENST00000508850 424 ntBASIC16.1■□□□□ 0.17
MT-CO1P00395 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.1■□□□□ 0.17
MT-CO1P00395 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
MT-CO1P00395 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
MT-CO1P00395 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-CO1P00395 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-CO1P00395 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
MT-CO1P00395 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.1■□□□□ 0.17
MT-CO1P00395 AC025048.6-201ENST00000634326 1161 ntBASIC16.1■□□□□ 0.17
MT-CO1P00395 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-CO1P00395 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
MT-CO1P00395 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-CO1P00395 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MT-CO1P00395 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
MT-CO1P00395 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
MT-CO1P00395 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-CO1P00395 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MT-CO1P00395 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
MT-CO1P00395 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.09■□□□□ 0.17
MT-CO1P00395 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-CO1P00395 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-CO1P00395 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
MT-CO1P00395 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.09■□□□□ 0.17
MT-CO1P00395 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MT-CO1P00395 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MT-CO1P00395 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.09■□□□□ 0.17
MT-CO1P00395 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-CO1P00395 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
MT-CO1P00395 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.09■□□□□ 0.17
MT-CO1P00395 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-CO1P00395 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.09■□□□□ 0.17
MT-CO1P00395 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-CO1P00395 TP53TG3HP-202ENST00000569755 579 ntBASIC16.09■□□□□ 0.17
MT-CO1P00395 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-CO1P00395 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-CO1P00395 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.09■□□□□ 0.17
MT-CO1P00395 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.09■□□□□ 0.17
MT-CO1P00395 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MT-CO1P00395 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
MT-CO1P00395 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.09■□□□□ 0.17
MT-CO1P00395 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MT-CO1P00395 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MT-CO1P00395 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
MT-CO1P00395 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MT-CO1P00395 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MT-CO1P00395 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MT-CO1P00395 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MT-CO1P00395 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MT-CO1P00395 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.08■□□□□ 0.17
MT-CO1P00395 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.08■□□□□ 0.17
MT-CO1P00395 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MT-CO1P00395 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.08■□□□□ 0.17
MT-CO1P00395 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MT-CO1P00395 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
MT-CO1P00395 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-CO1P00395 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-CO1P00395 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.08■□□□□ 0.16
MT-CO1P00395 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.08■□□□□ 0.16
MT-CO1P00395 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.08■□□□□ 0.16
MT-CO1P00395 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms