Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.12■□□□□ 0.17
TOP3BO95985 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TOP3BO95985 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.12■□□□□ 0.17
TOP3BO95985 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.12■□□□□ 0.17
TOP3BO95985 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.12■□□□□ 0.17
TOP3BO95985 AC004945.1-201ENST00000416738 983 ntBASIC16.12■□□□□ 0.17
TOP3BO95985 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.12■□□□□ 0.17
TOP3BO95985 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TOP3BO95985 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.12■□□□□ 0.17
TOP3BO95985 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.12■□□□□ 0.17
TOP3BO95985 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 AL512343.1-201ENST00000605837 169 ntBASIC16.12■□□□□ 0.17
TOP3BO95985 AL844908.2-201ENST00000609461 460 ntBASIC16.12■□□□□ 0.17
TOP3BO95985 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
TOP3BO95985 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
TOP3BO95985 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TOP3BO95985 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.12■□□□□ 0.17
TOP3BO95985 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.12■□□□□ 0.17
TOP3BO95985 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TOP3BO95985 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 AC092127.1-201ENST00000567093 3455 ntBASIC16.11■□□□□ 0.17
TOP3BO95985 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.11■□□□□ 0.17
TOP3BO95985 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.11■□□□□ 0.17
TOP3BO95985 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.11■□□□□ 0.17
TOP3BO95985 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.11■□□□□ 0.17
TOP3BO95985 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TOP3BO95985 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.11■□□□□ 0.17
TOP3BO95985 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
TOP3BO95985 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TOP3BO95985 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TOP3BO95985 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TOP3BO95985 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.11■□□□□ 0.17
TOP3BO95985 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 AC109635.5-201ENST00000533593 962 ntBASIC16.11■□□□□ 0.17
TOP3BO95985 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.11■□□□□ 0.17
TOP3BO95985 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.11■□□□□ 0.17
TOP3BO95985 RARRES2P9-201ENST00000565168 469 ntBASIC16.11■□□□□ 0.17
TOP3BO95985 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.11■□□□□ 0.17
TOP3BO95985 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.11■□□□□ 0.17
TOP3BO95985 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.11■□□□□ 0.17
TOP3BO95985 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.11■□□□□ 0.17
TOP3BO95985 AP3S2-216ENST00000617003 1561 ntBASIC16.11■□□□□ 0.17
TOP3BO95985 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.11■□□□□ 0.17
TOP3BO95985 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
TOP3BO95985 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.11■□□□□ 0.17
TOP3BO95985 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.11■□□□□ 0.17
TOP3BO95985 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 AC009090.5-201ENST00000624886 2285 ntBASIC16.11■□□□□ 0.17
TOP3BO95985 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.11■□□□□ 0.17
TOP3BO95985 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TOP3BO95985 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.1■□□□□ 0.17
TOP3BO95985 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.1■□□□□ 0.17
TOP3BO95985 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TOP3BO95985 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
TOP3BO95985 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TOP3BO95985 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TOP3BO95985 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms