Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15□□□□□ -0.01
LCMT2O60294 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
LCMT2O60294 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 AC138969.3-201ENST00000546612 1459 ntBASIC15□□□□□ -0.01
LCMT2O60294 AC138932.2-201ENST00000548268 1459 ntBASIC15□□□□□ -0.01
LCMT2O60294 AC126755.4-201ENST00000549796 1459 ntBASIC15□□□□□ -0.01
LCMT2O60294 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15□□□□□ -0.01
LCMT2O60294 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
LCMT2O60294 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LCMT2O60294 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15□□□□□ -0.01
LCMT2O60294 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15□□□□□ -0.01
LCMT2O60294 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCMT2O60294 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LCMT2O60294 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.99□□□□□ -0.01
LCMT2O60294 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LCMT2O60294 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.99□□□□□ -0.01
LCMT2O60294 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.99□□□□□ -0.01
LCMT2O60294 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.99□□□□□ -0.01
LCMT2O60294 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
LCMT2O60294 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
LCMT2O60294 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.99□□□□□ -0.01
LCMT2O60294 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.99□□□□□ -0.01
LCMT2O60294 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.99□□□□□ -0.01
LCMT2O60294 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.99□□□□□ -0.01
LCMT2O60294 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.99□□□□□ -0.01
LCMT2O60294 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.99□□□□□ -0.01
LCMT2O60294 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
LCMT2O60294 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 AL391069.4-201ENST00000609583 481 ntBASIC14.99□□□□□ -0.01
LCMT2O60294 AC009118.2-201ENST00000613275 655 ntBASIC14.99□□□□□ -0.01
LCMT2O60294 AC008761.3-201ENST00000624803 892 ntBASIC14.99□□□□□ -0.01
LCMT2O60294 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LCMT2O60294 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
LCMT2O60294 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.99□□□□□ -0.01
LCMT2O60294 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.99□□□□□ -0.01
LCMT2O60294 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.99□□□□□ -0.01
LCMT2O60294 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.99□□□□□ -0.01
LCMT2O60294 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.99□□□□□ -0.01
LCMT2O60294 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.99□□□□□ -0.01
LCMT2O60294 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LCMT2O60294 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.99□□□□□ -0.01
LCMT2O60294 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
LCMT2O60294 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LCMT2O60294 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LCMT2O60294 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LCMT2O60294 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LCMT2O60294 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LCMT2O60294 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LCMT2O60294 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LCMT2O60294 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LCMT2O60294 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LCMT2O60294 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LCMT2O60294 AL121723.1-201ENST00000445194 1519 ntBASIC14.98□□□□□ -0.01
LCMT2O60294 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.98□□□□□ -0.01
LCMT2O60294 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.98□□□□□ -0.01
LCMT2O60294 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LCMT2O60294 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.98□□□□□ -0.01
LCMT2O60294 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LCMT2O60294 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
LCMT2O60294 CLK3P2-201ENST00000427566 1453 ntBASIC14.98□□□□□ -0.01
LCMT2O60294 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LCMT2O60294 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LCMT2O60294 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms