Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 BASP1P1-201ENST00000430708 665 ntBASIC19.33■□□□□ 0.68
SMARCA5O60264 AL512638.1-201ENST00000457493 794 ntBASIC19.33■□□□□ 0.68
SMARCA5O60264 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCA5O60264 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCA5O60264 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SMARCA5O60264 AC104794.3-201ENST00000566840 1248 ntBASIC19.33■□□□□ 0.68
SMARCA5O60264 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.33■□□□□ 0.68
SMARCA5O60264 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCA5O60264 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCA5O60264 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SMARCA5O60264 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19.33■□□□□ 0.68
SMARCA5O60264 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
SMARCA5O60264 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCA5O60264 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCA5O60264 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCA5O60264 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCA5O60264 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCA5O60264 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.33■□□□□ 0.68
SMARCA5O60264 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.33■□□□□ 0.68
SMARCA5O60264 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCA5O60264 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCA5O60264 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.33■□□□□ 0.68
SMARCA5O60264 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC19.32■□□□□ 0.68
SMARCA5O60264 AC084364.1-201ENST00000551967 1556 ntBASIC19.32■□□□□ 0.68
SMARCA5O60264 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC19.32■□□□□ 0.68
SMARCA5O60264 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.32■□□□□ 0.68
SMARCA5O60264 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SMARCA5O60264 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.32■□□□□ 0.68
SMARCA5O60264 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SMARCA5O60264 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SMARCA5O60264 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.32■□□□□ 0.68
SMARCA5O60264 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.32■□□□□ 0.68
SMARCA5O60264 GNAQP1-201ENST00000444815 1067 ntBASIC19.32■□□□□ 0.68
SMARCA5O60264 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.32■□□□□ 0.68
SMARCA5O60264 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
SMARCA5O60264 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
SMARCA5O60264 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.32■□□□□ 0.68
SMARCA5O60264 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.32■□□□□ 0.68
SMARCA5O60264 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
SMARCA5O60264 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC19.32■□□□□ 0.68
SMARCA5O60264 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.32■□□□□ 0.68
SMARCA5O60264 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.32■□□□□ 0.68
SMARCA5O60264 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMARCA5O60264 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SMARCA5O60264 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.31■□□□□ 0.68
SMARCA5O60264 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.31■□□□□ 0.68
SMARCA5O60264 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SMARCA5O60264 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.31■□□□□ 0.68
SMARCA5O60264 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.31■□□□□ 0.68
SMARCA5O60264 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.31■□□□□ 0.68
SMARCA5O60264 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.31■□□□□ 0.68
SMARCA5O60264 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.31■□□□□ 0.68
SMARCA5O60264 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.31■□□□□ 0.68
SMARCA5O60264 SRD5A3P1-201ENST00000603021 949 ntBASIC19.31■□□□□ 0.68
SMARCA5O60264 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.31■□□□□ 0.68
SMARCA5O60264 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.31■□□□□ 0.68
SMARCA5O60264 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.31■□□□□ 0.68
SMARCA5O60264 KRT8P44-201ENST00000441609 1350 ntBASIC19.31■□□□□ 0.68
SMARCA5O60264 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.31■□□□□ 0.68
SMARCA5O60264 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMARCA5O60264 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SMARCA5O60264 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 AL121723.1-201ENST00000445194 1519 ntBASIC19.3■□□□□ 0.68
SMARCA5O60264 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCA5O60264 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.3■□□□□ 0.68
SMARCA5O60264 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms