Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PEX1O43933 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
PEX1O43933 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PEX1O43933 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.4■□□□□ 0.06
PEX1O43933 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.4■□□□□ 0.06
PEX1O43933 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PEX1O43933 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.39■□□□□ 0.05
PEX1O43933 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PEX1O43933 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.39■□□□□ 0.05
PEX1O43933 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PEX1O43933 AL592424.1-201ENST00000563624 1536 ntBASIC15.39■□□□□ 0.05
PEX1O43933 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.39■□□□□ 0.05
PEX1O43933 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PEX1O43933 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 HCG4-201ENST00000418983 998 ntBASIC15.39■□□□□ 0.05
PEX1O43933 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.39■□□□□ 0.05
PEX1O43933 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.39■□□□□ 0.05
PEX1O43933 FAM86C2P-203ENST00000528684 1004 ntBASIC15.39■□□□□ 0.05
PEX1O43933 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
PEX1O43933 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PEX1O43933 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.39■□□□□ 0.05
PEX1O43933 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PEX1O43933 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
PEX1O43933 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 MROH4P-201ENST00000431302 1578 ntBASIC15.39■□□□□ 0.05
PEX1O43933 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.39■□□□□ 0.05
PEX1O43933 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.39■□□□□ 0.05
PEX1O43933 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.39■□□□□ 0.05
PEX1O43933 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
PEX1O43933 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PEX1O43933 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.38■□□□□ 0.05
PEX1O43933 AL137784.3-201ENST00000623858 2288 ntBASIC15.38■□□□□ 0.05
PEX1O43933 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 AC112693.3-201ENST00000624819 1983 ntBASIC15.38■□□□□ 0.05
PEX1O43933 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PEX1O43933 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.38■□□□□ 0.05
PEX1O43933 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.38■□□□□ 0.05
PEX1O43933 AC004461.1-201ENST00000412461 403 ntBASIC15.38■□□□□ 0.05
PEX1O43933 AL355306.1-201ENST00000415580 579 ntBASIC15.38■□□□□ 0.05
PEX1O43933 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.38■□□□□ 0.05
PEX1O43933 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PEX1O43933 TIMM8BP1-201ENST00000452384 211 ntBASIC15.38■□□□□ 0.05
PEX1O43933 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.38■□□□□ 0.05
PEX1O43933 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.38■□□□□ 0.05
PEX1O43933 AC091167.2-201ENST00000579581 588 ntBASIC15.38■□□□□ 0.05
PEX1O43933 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.38■□□□□ 0.05
PEX1O43933 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PEX1O43933 AC022145.2-201ENST00000598203 171 ntBASIC15.38■□□□□ 0.05
PEX1O43933 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.38■□□□□ 0.05
PEX1O43933 AC027612.4-201ENST00000605371 583 ntBASIC15.38■□□□□ 0.05
PEX1O43933 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.38■□□□□ 0.05
PEX1O43933 AC099522.2-201ENST00000607001 744 ntBASIC15.38■□□□□ 0.05
PEX1O43933 AC026120.1-201ENST00000611536 926 ntBASIC15.38■□□□□ 0.05
PEX1O43933 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.38■□□□□ 0.05
PEX1O43933 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.38■□□□□ 0.05
PEX1O43933 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 AC090616.6-203ENST00000579186 1945 ntBASIC15.38■□□□□ 0.05
PEX1O43933 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.38■□□□□ 0.05
PEX1O43933 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.38■□□□□ 0.05
PEX1O43933 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.38■□□□□ 0.05
PEX1O43933 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.38■□□□□ 0.05
PEX1O43933 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
PEX1O43933 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.38■□□□□ 0.05
PEX1O43933 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms