Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.21□□□□□ -0.45
PDE6DO43924 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.21□□□□□ -0.45
PDE6DO43924 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.21□□□□□ -0.45
PDE6DO43924 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PDE6DO43924 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
PDE6DO43924 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PDE6DO43924 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PDE6DO43924 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.21□□□□□ -0.45
PDE6DO43924 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.21□□□□□ -0.45
PDE6DO43924 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.21□□□□□ -0.45
PDE6DO43924 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.21□□□□□ -0.45
PDE6DO43924 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.21□□□□□ -0.45
PDE6DO43924 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.21□□□□□ -0.45
PDE6DO43924 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
PDE6DO43924 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
PDE6DO43924 AL121672.3-201ENST00000608644 468 ntBASIC12.21□□□□□ -0.45
PDE6DO43924 AL805961.1-202ENST00000641562 540 ntBASIC12.21□□□□□ -0.45
PDE6DO43924 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PDE6DO43924 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.21□□□□□ -0.45
PDE6DO43924 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
PDE6DO43924 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
PDE6DO43924 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PDE6DO43924 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.21□□□□□ -0.46
PDE6DO43924 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.21□□□□□ -0.46
PDE6DO43924 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.21□□□□□ -0.46
PDE6DO43924 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.46
PDE6DO43924 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.21□□□□□ -0.46
PDE6DO43924 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
PDE6DO43924 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.21□□□□□ -0.46
PDE6DO43924 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
PDE6DO43924 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.21□□□□□ -0.46
PDE6DO43924 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PDE6DO43924 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PDE6DO43924 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PDE6DO43924 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PDE6DO43924 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.2□□□□□ -0.46
PDE6DO43924 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
PDE6DO43924 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
PDE6DO43924 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.2□□□□□ -0.46
PDE6DO43924 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
PDE6DO43924 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.2□□□□□ -0.46
PDE6DO43924 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.2□□□□□ -0.46
PDE6DO43924 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.2□□□□□ -0.46
PDE6DO43924 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.2□□□□□ -0.46
PDE6DO43924 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.2□□□□□ -0.46
PDE6DO43924 PMS2P4-201ENST00000412466 1052 ntBASIC12.2□□□□□ -0.46
PDE6DO43924 AC113347.1-201ENST00000413321 391 ntBASIC12.2□□□□□ -0.46
PDE6DO43924 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
PDE6DO43924 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.2□□□□□ -0.46
PDE6DO43924 AL671277.2-201ENST00000458060 996 ntBASIC12.2□□□□□ -0.46
PDE6DO43924 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.2□□□□□ -0.46
PDE6DO43924 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.2□□□□□ -0.46
PDE6DO43924 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.2□□□□□ -0.46
PDE6DO43924 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.2□□□□□ -0.46
PDE6DO43924 GGTLC5P-201ENST00000617623 998 ntBASIC12.2□□□□□ -0.46
PDE6DO43924 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.2□□□□□ -0.46
PDE6DO43924 AL139288.1-201ENST00000623748 933 ntBASIC12.2□□□□□ -0.46
PDE6DO43924 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
PDE6DO43924 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
PDE6DO43924 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.2□□□□□ -0.46
PDE6DO43924 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.2□□□□□ -0.46
PDE6DO43924 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
PDE6DO43924 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 DMBT1P1-203ENST00000636837 4628 ntBASIC12.2□□□□□ -0.46
PDE6DO43924 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PDE6DO43924 AP005117.1-201ENST00000584346 1413 ntBASIC12.2□□□□□ -0.46
PDE6DO43924 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms