Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.66■□□□□ 0.1
PHGDHO43175 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 FAM58DP-201ENST00000428076 619 ntBASIC15.66■□□□□ 0.1
PHGDHO43175 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.66■□□□□ 0.1
PHGDHO43175 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.66■□□□□ 0.1
PHGDHO43175 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.66■□□□□ 0.1
PHGDHO43175 BANF1P1-201ENST00000553684 263 ntBASIC15.66■□□□□ 0.1
PHGDHO43175 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.66■□□□□ 0.1
PHGDHO43175 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.66■□□□□ 0.1
PHGDHO43175 AC055717.3-201ENST00000622967 595 ntBASIC15.66■□□□□ 0.1
PHGDHO43175 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.66■□□□□ 0.1
PHGDHO43175 AC148477.4-201ENST00000613430 1793 ntBASIC15.66■□□□□ 0.1
PHGDHO43175 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PHGDHO43175 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PHGDHO43175 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PHGDHO43175 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 AGAP7P-201ENST00000582299 2062 ntBASIC15.66■□□□□ 0.1
PHGDHO43175 AGAP14-201ENST00000624701 2060 ntBASIC15.66■□□□□ 0.1
PHGDHO43175 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHGDHO43175 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.65■□□□□ 0.1
PHGDHO43175 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PHGDHO43175 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.65■□□□□ 0.1
PHGDHO43175 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PHGDHO43175 AC126365.1-201ENST00000578585 1514 ntBASIC15.65■□□□□ 0.1
PHGDHO43175 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PHGDHO43175 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
PHGDHO43175 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PHGDHO43175 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.65■□□□□ 0.1
PHGDHO43175 KRT18P32-201ENST00000424695 1287 ntBASIC15.65■□□□□ 0.1
PHGDHO43175 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.65■□□□□ 0.1
PHGDHO43175 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 ALG1L8P-201ENST00000533887 760 ntBASIC15.65■□□□□ 0.1
PHGDHO43175 AC093520.2-201ENST00000561830 333 ntBASIC15.65■□□□□ 0.1
PHGDHO43175 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.65■□□□□ 0.1
PHGDHO43175 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.65■□□□□ 0.1
PHGDHO43175 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PHGDHO43175 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.65■□□□□ 0.1
PHGDHO43175 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.65■□□□□ 0.1
PHGDHO43175 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHGDHO43175 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
PHGDHO43175 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
PHGDHO43175 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.64■□□□□ 0.09
PHGDHO43175 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.64■□□□□ 0.09
PHGDHO43175 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.64■□□□□ 0.09
PHGDHO43175 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.64■□□□□ 0.09
PHGDHO43175 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.64■□□□□ 0.09
PHGDHO43175 AL645939.2-201ENST00000427340 991 ntBASIC15.64■□□□□ 0.09
PHGDHO43175 AL353705.2-201ENST00000428243 662 ntBASIC15.64■□□□□ 0.09
PHGDHO43175 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.64■□□□□ 0.09
PHGDHO43175 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.64■□□□□ 0.09
PHGDHO43175 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.64■□□□□ 0.09
PHGDHO43175 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.64■□□□□ 0.09
PHGDHO43175 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PHGDHO43175 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.64■□□□□ 0.09
PHGDHO43175 AC005829.1-201ENST00000570002 483 ntBASIC15.64■□□□□ 0.09
PHGDHO43175 AC105021.1-202ENST00000570572 669 ntBASIC15.64■□□□□ 0.09
PHGDHO43175 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHGDHO43175 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.64■□□□□ 0.09
PHGDHO43175 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms