Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC114501.2-201ENST00000439631 535 ntBASIC15.03■□□□□ -0
PCDH17O14917 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.03■□□□□ -0
PCDH17O14917 SPTLC1P1-201ENST00000447199 261 ntBASIC15.03■□□□□ -0
PCDH17O14917 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH17O14917 SERBP1P5-201ENST00000510079 1181 ntBASIC15.03■□□□□ -0
PCDH17O14917 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.03■□□□□ -0
PCDH17O14917 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
PCDH17O14917 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.03■□□□□ -0
PCDH17O14917 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH17O14917 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH17O14917 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH17O14917 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.03■□□□□ -0
PCDH17O14917 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH17O14917 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH17O14917 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.03■□□□□ -0
PCDH17O14917 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH17O14917 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.03■□□□□ -0
PCDH17O14917 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.03■□□□□ -0
PCDH17O14917 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH17O14917 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCDH17O14917 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH17O14917 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDH17O14917 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PCDH17O14917 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PCDH17O14917 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDH17O14917 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.02■□□□□ -0
PCDH17O14917 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.02■□□□□ -0
PCDH17O14917 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH17O14917 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.02■□□□□ -0
PCDH17O14917 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.02■□□□□ -0
PCDH17O14917 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDH17O14917 AL691432.1-201ENST00000596308 1422 ntBASIC15.02■□□□□ -0
PCDH17O14917 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PCDH17O14917 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH17O14917 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH17O14917 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.02■□□□□ -0
PCDH17O14917 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDH17O14917 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
PCDH17O14917 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.02■□□□□ -0
PCDH17O14917 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PCDH17O14917 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.02■□□□□ -0
PCDH17O14917 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH17O14917 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDH17O14917 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH17O14917 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH17O14917 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
PCDH17O14917 GK-202ENST00000378941 458 ntTSL 3 BASIC15.02■□□□□ -0
PCDH17O14917 AL353779.1-201ENST00000434793 351 ntBASIC15.02■□□□□ -0
PCDH17O14917 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PCDH17O14917 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDH17O14917 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDH17O14917 AC093004.1-201ENST00000508850 424 ntBASIC15.02■□□□□ -0
PCDH17O14917 AC135586.1-201ENST00000539323 574 ntBASIC15.02■□□□□ -0
PCDH17O14917 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDH17O14917 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.02■□□□□ -0
PCDH17O14917 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
PCDH17O14917 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.02■□□□□ -0
PCDH17O14917 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.02■□□□□ -0
PCDH17O14917 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.02□□□□□ -0.01
PCDH17O14917 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH17O14917 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH17O14917 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PCDH17O14917 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH17O14917 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PCDH17O14917 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PCDH17O14917 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDH17O14917 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH17O14917 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH17O14917 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDH17O14917 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PCDH17O14917 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDH17O14917 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 NORAD-201ENST00000565493 5339 ntBASIC15.01□□□□□ -0.01
PCDH17O14917 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDH17O14917 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PCDH17O14917 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH17O14917 AC087499.6-201ENST00000411576 835 ntBASIC15.01□□□□□ -0.01
PCDH17O14917 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH17O14917 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDH17O14917 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDH17O14917 AL512361.1-201ENST00000554200 418 ntBASIC15.01□□□□□ -0.01
PCDH17O14917 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDH17O14917 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDH17O14917 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms