Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM38O00635 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM38O00635 GPAA1P2-202ENST00000606848 1787 ntBASIC15.84■□□□□ 0.13
TRIM38O00635 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRIM38O00635 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM38O00635 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRIM38O00635 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM38O00635 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM38O00635 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM38O00635 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM38O00635 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.83■□□□□ 0.13
TRIM38O00635 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM38O00635 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM38O00635 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.83■□□□□ 0.13
TRIM38O00635 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.83■□□□□ 0.13
TRIM38O00635 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM38O00635 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
TRIM38O00635 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM38O00635 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM38O00635 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM38O00635 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM38O00635 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRIM38O00635 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM38O00635 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM38O00635 AL512384.1-201ENST00000406683 331 ntBASIC15.83■□□□□ 0.12
TRIM38O00635 SPDYE17-201ENST00000412399 783 ntBASIC15.83■□□□□ 0.12
TRIM38O00635 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM38O00635 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM38O00635 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM38O00635 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM38O00635 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM38O00635 AC026979.3-201ENST00000607315 403 ntBASIC15.83■□□□□ 0.12
TRIM38O00635 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.83■□□□□ 0.12
TRIM38O00635 AC007431.3-201ENST00000623221 587 ntBASIC15.83■□□□□ 0.12
TRIM38O00635 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM38O00635 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.83■□□□□ 0.12
TRIM38O00635 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM38O00635 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM38O00635 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRIM38O00635 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM38O00635 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM38O00635 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM38O00635 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM38O00635 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM38O00635 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM38O00635 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM38O00635 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM38O00635 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM38O00635 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM38O00635 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM38O00635 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM38O00635 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM38O00635 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM38O00635 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM38O00635 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM38O00635 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM38O00635 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM38O00635 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM38O00635 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.82■□□□□ 0.12
TRIM38O00635 SRD5A3P1-201ENST00000603021 949 ntBASIC15.82■□□□□ 0.12
TRIM38O00635 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRIM38O00635 AC004461.2-201ENST00000629517 803 ntBASIC15.82■□□□□ 0.12
TRIM38O00635 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM38O00635 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM38O00635 SLC7A15P-201ENST00000424028 1363 ntBASIC15.82■□□□□ 0.12
TRIM38O00635 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM38O00635 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms