Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.98■□□□□ 0.15
CAPN8A6NHC0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 AL009178.2-201ENST00000597278 2719 ntBASIC15.98■□□□□ 0.15
CAPN8A6NHC0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN8A6NHC0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 HNRNPUP1-201ENST00000554987 333 ntBASIC15.97■□□□□ 0.15
CAPN8A6NHC0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 AC025048.6-201ENST00000634326 1161 ntBASIC15.97■□□□□ 0.15
CAPN8A6NHC0 AC018892.3-201ENST00000623986 2499 ntBASIC15.97■□□□□ 0.15
CAPN8A6NHC0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPN8A6NHC0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 CU639417.3-201ENST00000624240 1404 ntBASIC15.96■□□□□ 0.15
CAPN8A6NHC0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 NORAD-201ENST00000565493 5339 ntBASIC15.96■□□□□ 0.15
CAPN8A6NHC0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.96■□□□□ 0.15
CAPN8A6NHC0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.96■□□□□ 0.15
CAPN8A6NHC0 AC025048.3-201ENST00000590609 569 ntBASIC15.96■□□□□ 0.15
CAPN8A6NHC0 AC084346.2-201ENST00000607097 949 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms