Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV5-4A0A0C4DH59 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV5-4A0A0C4DH59 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.35■□□□□ 0.05
TRBV5-4A0A0C4DH59 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV5-4A0A0C4DH59 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV5-4A0A0C4DH59 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV5-4A0A0C4DH59 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
TRBV5-4A0A0C4DH59 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV5-4A0A0C4DH59 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 AC007541.1-201ENST00000570282 1469 ntBASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 AL049840.4-201ENST00000602422 811 ntBASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 CHCHD2P3-201ENST00000603038 451 ntBASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV5-4A0A0C4DH59 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV5-4A0A0C4DH59 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV5-4A0A0C4DH59 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.33■□□□□ 0.05
TRBV5-4A0A0C4DH59 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TRBV5-4A0A0C4DH59 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV5-4A0A0C4DH59 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
TRBV5-4A0A0C4DH59 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
TRBV5-4A0A0C4DH59 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV5-4A0A0C4DH59 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV5-4A0A0C4DH59 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV5-4A0A0C4DH59 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV5-4A0A0C4DH59 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC087499.6-201ENST00000411576 835 ntBASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 PIN1P1-201ENST00000412108 996 ntBASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC098850.1-201ENST00000419919 790 ntBASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV5-4A0A0C4DH59 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms