Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAD54BQ9Y620 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAD54BQ9Y620 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAD54BQ9Y620 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAD54BQ9Y620 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAD54BQ9Y620 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAD54BQ9Y620 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.3■□□□□ 0.2
RAD54BQ9Y620 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 HYMAI-201ENST00000635591 3347 ntBASIC16.29■□□□□ 0.2
RAD54BQ9Y620 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 LINC00554-201ENST00000564841 3011 ntBASIC16.29■□□□□ 0.2
RAD54BQ9Y620 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 HILS1-202ENST00000545329 423 ntBASIC16.29■□□□□ 0.2
RAD54BQ9Y620 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD54BQ9Y620 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 AC087481.3-201ENST00000602886 1894 ntBASIC16.28■□□□□ 0.2
RAD54BQ9Y620 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAD54BQ9Y620 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms