Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 MIR4453-201ENST00000584019 89 ntBASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 MIR6080-201ENST00000617359 66 ntBASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA11Q9Y5H2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 AC090616.6-203ENST00000579186 1945 ntBASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 CICP24-201ENST00000605464 2705 ntBASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 MTND6P24-201ENST00000440466 518 ntBASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 AL133215.2-201ENST00000609242 977 ntBASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 AC079781.4-201ENST00000641908 219 ntBASIC15.27■□□□□ 0.04
PCDHGA11Q9Y5H2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA11Q9Y5H2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA11Q9Y5H2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA11Q9Y5H2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDHGA11Q9Y5H2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA11Q9Y5H2 AC138035.3-201ENST00000622706 2791 ntBASIC15.27■□□□□ 0.03
PCDHGA11Q9Y5H2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA11Q9Y5H2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA11Q9Y5H2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA11Q9Y5H2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA11Q9Y5H2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHGA11Q9Y5H2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA11Q9Y5H2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGA11Q9Y5H2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 KRT8P12-202ENST00000472924 1397 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms