Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHB7Q9Y5E2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHB7Q9Y5E2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 MIR1202-201ENST00000408529 83 ntBASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 Z93015.1-201ENST00000451718 390 ntBASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 FAM86HP-204ENST00000513466 959 ntBASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 AC084346.2-201ENST00000607097 949 ntBASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 PRORSD1P-202ENST00000563365 2154 ntBASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB7Q9Y5E2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 AC124067.4-201ENST00000519691 2379 ntBASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 BTBD6P1-201ENST00000412176 1267 ntBASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 NUS1P3-201ENST00000423502 862 ntBASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 AC006033.1-201ENST00000440505 426 ntBASIC16.75■□□□□ 0.27
PCDHB7Q9Y5E2 GOLGA2P4-201ENST00000441462 777 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms