Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 MIR648-201ENST00000385046 94 ntBASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 AP006294.1-201ENST00000415407 339 ntBASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 WASH4P-201ENST00000564273 1246 ntBASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 AC004790.1-201ENST00000612686 536 ntBASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FNDC3AQ9Y2H6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 AL136982.4-201ENST00000437689 1740 ntBASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 RN7SL752P-201ENST00000463779 287 ntBASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 RN7SL618P-201ENST00000477850 296 ntBASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 PCDHA3-202ENST00000532566 4594 ntBASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
FNDC3AQ9Y2H6 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 BTBD7P1-201ENST00000447253 1453 ntBASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 SPDYE19P-201ENST00000338590 713 ntBASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 AL512384.1-201ENST00000406683 331 ntBASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 ZNF890P-202ENST00000530367 1156 ntBASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 AL512361.1-201ENST00000554200 418 ntBASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 AC132938.2-201ENST00000579188 680 ntBASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 AC008494.3-201ENST00000606615 944 ntBASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 AL591163.1-201ENST00000641757 987 ntBASIC16.1■□□□□ 0.17
FNDC3AQ9Y2H6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms