Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 ALG1L3P-201ENST00000503331 765 ntBASIC6.19□□□□□ -1.42
MACF1Q9UPN3 PSME3-213ENST00000592169 826 ntTSL 3 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 MECP2-226ENST00000640414 897 ntTSL 5 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 AC022532.1-201ENST00000624563 1728 ntBASIC6.19□□□□□ -1.42
MACF1Q9UPN3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 FUCA1P1-201ENST00000374476 1351 ntBASIC6.19□□□□□ -1.42
MACF1Q9UPN3 FKBP4P8-201ENST00000610931 1369 ntBASIC6.19□□□□□ -1.42
MACF1Q9UPN3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MACF1Q9UPN3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 LINC00618-201ENST00000435624 700 ntTSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 NAT9-204ENST00000578822 839 ntTSL 3 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 TRMT112P3-201ENST00000580149 358 ntBASIC6.18□□□□□ -1.42
MACF1Q9UPN3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 RNF7-202ENST00000393000 805 ntTSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 AL954722.1-201ENST00000431238 259 ntBASIC6.18□□□□□ -1.42
MACF1Q9UPN3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 MARK2P16-201ENST00000605714 1723 ntBASIC6.18□□□□□ -1.42
MACF1Q9UPN3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 AC244394.1-201ENST00000435000 1665 ntBASIC6.18□□□□□ -1.42
MACF1Q9UPN3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 AC002472.3-201ENST00000640124 621 ntBASIC6.18□□□□□ -1.42
MACF1Q9UPN3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 ANKRD26P1-203ENST00000569528 966 ntBASIC6.18□□□□□ -1.42
MACF1Q9UPN3 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 PPY-202ENST00000587006 431 ntTSL 3 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 AC009884.2-201ENST00000603110 324 ntBASIC6.18□□□□□ -1.42
MACF1Q9UPN3 RN7SL827P-201ENST00000607480 288 ntBASIC6.18□□□□□ -1.42
MACF1Q9UPN3 Z98259.2-201ENST00000641583 609 ntBASIC6.18□□□□□ -1.42
MACF1Q9UPN3 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
MACF1Q9UPN3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms