Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 AC012569.1-201ENST00000591191 1524 ntBASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RPH3ALQ9UNE2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 AC008608.2-201ENST00000606089 416 ntBASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 AC090114.2-201ENST00000608477 7054 ntBASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 CICP23-201ENST00000605013 2741 ntBASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms