Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL20A1Q9P218 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL20A1Q9P218 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL20A1Q9P218 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL20A1Q9P218 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
COL20A1Q9P218 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL20A1Q9P218 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL20A1Q9P218 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
COL20A1Q9P218 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL20A1Q9P218 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.58■□□□□ 0.4
COL20A1Q9P218 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL20A1Q9P218 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.57■□□□□ 0.4
COL20A1Q9P218 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL20A1Q9P218 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL20A1Q9P218 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL20A1Q9P218 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL20A1Q9P218 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 KLF2P2-201ENST00000416807 1039 ntBASIC17.57■□□□□ 0.4
COL20A1Q9P218 CNN2P8-201ENST00000421872 913 ntBASIC17.57■□□□□ 0.4
COL20A1Q9P218 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 FO681548.1-201ENST00000455617 1132 ntBASIC17.57■□□□□ 0.4
COL20A1Q9P218 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL20A1Q9P218 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 MIR6799-201ENST00000620297 69 ntBASIC17.57■□□□□ 0.4
COL20A1Q9P218 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL20A1Q9P218 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL20A1Q9P218 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL20A1Q9P218 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL20A1Q9P218 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL20A1Q9P218 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.57■□□□□ 0.4
COL20A1Q9P218 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL20A1Q9P218 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL20A1Q9P218 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 TNRC18P3-201ENST00000441896 2691 ntBASIC17.56■□□□□ 0.4
COL20A1Q9P218 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 KRT8P35-201ENST00000483942 1338 ntBASIC17.56■□□□□ 0.4
COL20A1Q9P218 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 AC007787.1-201ENST00000588095 1583 ntBASIC17.56■□□□□ 0.4
COL20A1Q9P218 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.56■□□□□ 0.4
COL20A1Q9P218 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL20A1Q9P218 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms