Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
KCMF1Q9P0J7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 AC009090.5-201ENST00000624886 2285 ntBASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 TSPY16P-201ENST00000449843 468 ntBASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KCMF1Q9P0J7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 AC090616.6-203ENST00000579186 1945 ntBASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 TOMM22P5-201ENST00000416399 439 ntBASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 SLED1-202ENST00000512051 380 ntBASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 AC092337.1-201ENST00000568699 1129 ntBASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
KCMF1Q9P0J7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
KCMF1Q9P0J7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms