Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 CSF2RBP1-201ENST00000447905 391 ntBASIC18.74■□□□□ 0.59
SALL1Q9NSC2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 RNA5SP412-201ENST00000516234 123 ntBASIC18.74■□□□□ 0.59
SALL1Q9NSC2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 AC244669.2-201ENST00000612320 853 ntBASIC18.74■□□□□ 0.59
SALL1Q9NSC2 MIR6799-201ENST00000620297 69 ntBASIC18.74■□□□□ 0.59
SALL1Q9NSC2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SALL1Q9NSC2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 CNN2P8-201ENST00000421872 913 ntBASIC18.73■□□□□ 0.59
SALL1Q9NSC2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 AL583810.1-201ENST00000553344 1045 ntBASIC18.73■□□□□ 0.59
SALL1Q9NSC2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 AC025279.2-201ENST00000569730 653 ntBASIC18.73■□□□□ 0.59
SALL1Q9NSC2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SALL1Q9NSC2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.72■□□□□ 0.59
SALL1Q9NSC2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 BX539320.1-201ENST00000623759 877 ntBASIC18.72■□□□□ 0.59
SALL1Q9NSC2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SALL1Q9NSC2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 AC104640.1-201ENST00000562617 2109 ntBASIC18.71■□□□□ 0.59
SALL1Q9NSC2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.71■□□□□ 0.59
SALL1Q9NSC2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms